Methanosarcina thermophila CHTI-55: MSTHC_0821
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Entry
MSTHC_0821 CDS
T03891
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mthe
Methanosarcina thermophila CHTI-55
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthe03400
]
MSTHC_0821
DNA repair and recombination proteins [BR:
mthe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSTHC_0821
Archaeal homologous recombinant proteins
MSTHC_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
DUF2937
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKB15139
UniProt:
A0A0E3HA30
LinkDB
All DBs
Position
complement(1041016..1044240)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLYIENIRSYKKLNFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVIFKGAENAKISLGFEHLGQDYLIEQAFRYSPKSENASSSKCVLYANGECIVDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDDLLQLGKLEEYRERAGSAK
TAVRRLQRDVGNNLSAIKAEIEKIESTEPHAVLRGLKQKIKECDAALEKCNKDKEVAAAQ
KEKLDMMAAEYRERLQEINTLKQALLKSQEGKASCIRERETLSGEAREQRQVLLELGREN
NSIREECGFGDLDIETLSLQQEKEEFLAREKMNGISKELALLLREEEVHTQALSDLEKEK
VEVEQIFVQCRADIEAANEEIERNRKSILKIEEENERLKETAKDTINFSETYEISLFIKE
LEEKENLLRERRNEASTKLALAFKEKETGDINLLTLDKELQNLKAAVRRGKTEIEILEER
LRENARAVQEVQEQKSEASTGLKGLGFTEEQLEDLEYLSELLLESKNRLHGREKELEATI
RELDKVLRKNQQLLAEGKCPTCGQELKGSEIACMTEESEQKKEKLTAELLDIKLQQAEIE
KKLNRLKDAKKLEKIISDYDLEIEKLRNKAKELQERITIHKTRTEEDSLKLEGLIRQKQE
LETKMGQLLPDIKALQGWEEAARKAHSESEKTLREARAFEKKLAENASEIDALNGKIRTS
LALIENYGQRLGELNEKLISLAERENLEKEKLKALGVELEALRTKEDLAKKAHQKSENLL
QQVKKLRANLLRMDVIKHKISELEASIKNLTEKIDFFDQEIFERSERVKQLERKLQGYRF
EDLQNKRAQLEAYQANISEKIRQITASKDAFLKDAGMVENSLKRRNELKEELRALENRQL
YLEAVYSNAEDLENMYMRVRADMRARNIEALSTLLNEMFSFMYTNNAYSHIELDSEYNLT
VYRKDGTPLQPKLLSGGERAIFNLALRCAIYRLLALGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDLMRSIGVGQIIVVSHDETLIDSADHVFLVEKDPLTNMSSIVKI
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctcaaaaacctgtatatcgaaaacatccggagttataagaaactgaattttaca
tttgaagacggagttacagtcatttccggagttaatgggagcgggaagtccagcctgctt
gaagcctgttttatgggactttttgggagcaaaattctttcaaaggatttcgtgcttgca
gatgtaatctttaaaggggctgaaaatgcgaaaataagcctgggttttgagcatttaggg
caggattatcttatcgaacaggctttcaggtattcgcctaagagtgaaaatgcttcgagc
tcaaaatgcgtactctatgccaacggagaatgtattgtcgatcaggctacacggacttac
gaagaggtctgttcccttttaaatatggatgaagaggcatacaggaactgtgcttacatc
cggcagggcgaaattgatgtactcattaatgcaaagccaaaagacaggcagcgtatgatt
gatgaccttttacagcttggaaaacttgaagagtacagggaaagagcagggagtgcaaaa
acagctgtcagaaggcttcaaagggatgtaggtaacaacctttcagccataaaagccgaa
atcgagaaaattgaaagtacagaaccgcatgcagtgctgagggggctcaagcagaagata
aaggaatgcgatgcagcattagaaaaatgtaataaggataaagaggttgcagcagcccaa
aaagaaaaactcgatatgatggctgcagagtacagggagcgacttcaagaaataaacact
ctgaaacaggctctacttaaatcccaggagggtaaagctagctgcatcagagaaagagaa
accctctcaggagaagcccgtgagcaaaggcaggttttgctcgaactgggaagggaaaat
aattctatccgggaggaatgcggctttggagaccttgatattgagacactgagcttgcaa
caggaaaaagaagagttccttgccagggaaaagatgaatggaatctcaaaagaactagct
ctccttctaagggaagaggaagtccacactcaggctttaagtgaccttgagaaagagaag
gttgaggttgaacagatttttgtgcagtgcagggctgatatagaagctgcaaatgaggaa
atcgaaagaaacaggaagagtatcctgaaaatcgaggaagaaaatgaaagacttaaggaa
actgcgaaagatactataaatttctccgaaacctatgagatttccttatttataaaggaa
ctggaagaaaaagaaaacttattgcgtgaaaggagaaacgaagcctctacaaagcttgct
cttgccttcaaagaaaaagaaactggagatataaatcttctcacgctcgataaggaactt
caaaatctcaaagctgcagttcgtaggggcaaaaccgaaattgagatccttgaagaaagg
ctccgggagaatgcaagggcagttcaggaagtccaggaacagaagtctgaagcttccaca
gggttaaaggggcttgggttcaccgaagaacagctagaggatctggaatatctgagtgaa
ctgcttctggagagtaaaaacaggctgcatgggcgggaaaaagagctagaggcgaccatc
agggagcttgataaggtactccgtaaaaaccagcaattgcttgccgaaggaaaatgtcca
acctgtgggcaggagcttaaaggctcagagattgcctgcatgacagaggaatctgaacag
aagaaagaaaagcttacagcagaacttcttgatataaagctccagcaggctgagattgag
aaaaagctcaaccgattaaaggatgcaaaaaaactggagaaaataatctcggattatgat
ctggaaatcgaaaaactcaggaataaggcaaaagagcttcaagaaaggataacgatccac
aaaacccggactgaagaagattctcttaaacttgagggacttatcaggcaaaagcaggaa
cttgaaactaaaatgggtcagctcctacccgatataaaagcccttcagggctgggaggag
gcagccaggaaagcccacagtgagagtgaaaaaacgcttcgagaggcaagagcctttgag
aaaaagcttgctgaaaacgcgtcagagattgatgccctgaatggaaaaataaggacatct
cttgcactgattgaaaactacggacaaaggctaggagagctcaatgaaaaattgataagc
cttgccgaacgtgagaatctggaaaaggagaaactcaaggctctgggagttgagcttgag
gcattgaggacgaaagaagacctggcaaaaaaagcccatcagaaaagtgagaatctcctc
cagcaagtaaaaaagctcagagcgaatctgctccgcatggatgtcataaagcacaaaatt
tccgagctcgaagcttccataaagaacctgacggaaaagatcgatttctttgaccaggag
atctttgagagaagcgagcgggtgaaacagcttgagagaaagctacagggatacaggttt
gaagatctccagaataaacgtgcccagcttgaagcatatcaggcaaacatttccgagaaa
atccgacaaattacggcttcaaaagatgcatttttaaaggacgccggtatggtcgagaac
agcttaaaacgccgcaatgagctgaaagaagaactcagggctcttgaaaacagacagcta
tatcttgaagccgtgtacagtaatgctgaggatcttgagaacatgtatatgcgtgttcgg
gctgatatgcgggcaagaaacatagaggccctttctaccctgctgaatgaaatgtttagc
ttcatgtacacgaacaatgcatattcccatatagaacttgactcggagtataaccttacg
gtttacagaaaagacggtacgcctcttcagcccaaactcctcagcgggggagaacgtgcc
atttttaatcttgccctgcgctgtgctatctacagacttcttgctctcggttttggcggt
gacagggcagatgggcttccgccaatgattctagacgagcccacggttttcctggaccgc
ggacatataaaccagcttttgaaactcatagacctgatgcgcagcataggggtaggtcag
attattgtagtctctcatgatgaaaccctgatagattccgcagaccacgtcttcctggta
gaaaaagaccctcttaccaatatgtcgtctattgtaaaaatctaa
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integrated database retrieval system
