Methanosarcina thermophila CHTI-55: MSTHC_0829
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Entry
MSTHC_0829 CDS
T03891
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mthe
Methanosarcina thermophila CHTI-55
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthe03016
]
MSTHC_0829
Enzymes [BR:
mthe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSTHC_0829
Transfer RNA biogenesis [BR:
mthe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSTHC_0829
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AKB15147
UniProt:
A0A0E3L0B3
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All DBs
Position
complement(1055483..1056535)
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AA seq
350 aa
AA seq
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MRTQLKGDRVLAGKEAVTELYKTGYFGRLKGDGLELSLVEAAFLLSRGKLEIELEGTLLD
FRTFFEQASLRQPNFELKYIVYKDLKERGYYVQPSAVDFRVYPRGSHPGKSAAKIFVHVQ
SERQLLPVKLLQDSVASAENVHKQFILAVVDEESDLTFYEVKTKVPEGEMPEPYPAVKTD
ATFLEDRVIVWDARISEILYSKGFYGKMLDSERLQLSLVESLYLFSRGVITIRDRKGKVL
SFDEFTEKASKIESSFMRKYSVYKNLRDSGHVVKTGFKFGTNFRVYRKVESVEKIPHSEY
LVNVIPADFEFKLPVMSGAVRLANSVRKTMLFAIEKGEEVKYLDISRTKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgagaacacaacttaaaggagaccgagtccttgccggaaaggaagcggtaaccgagctt
tacaaaactggttatttcggacgcctcaaaggtgatgggctcgaactctcacttgtagaa
gctgctttccttctgtccagaggaaagctagaaatcgaactcgagggtacattgcttgat
ttcagaaccttttttgagcaagcttctttaaggcagccgaattttgagctgaaatatatc
gtttataaggatctcaaagagagggggtactacgtccagccgtcagctgtggatttccgg
gtgtatccaagaggcagccatccgggtaagagtgcggcaaaaatctttgtccacgttcaa
tcggaaagacaactccttcctgtgaaacttctacaggactcggttgcctcggcagagaat
gtacacaagcagtttatcctggctgtagtggatgaggaaagtgatcttacattctatgag
gttaaaactaaagtccctgaaggagagatgcctgagccatatcctgcggtcaaaaccgat
gctactttcctggaagacagggtgatagtctgggatgcccgaatttcggagattctctat
tcaaagggcttctacgggaaaatgctggattctgaaaggctgcagctctccctggtagag
tccctttatctcttttccagaggcgtgataacgattcgggacaggaaaggtaaagtgctt
tcattcgacgagtttactgagaaagcctcgaagattgagagttctttcatgagaaagtac
agtgtatataagaacctcagggactctgggcatgtggtcaaaaccggatttaagttcggg
acgaatttcagggtataccgaaaagtcgaatcagtagaaaaaatcccacattccgaatac
cttgtaaatgtcatccctgcagatttcgagtttaagcttcctgtcatgtcgggagcggtc
aggcttgcaaatagtgtaaggaagacaatgctttttgcgatcgagaaaggagaggaagtt
aaatatctggatatcagccgaacgaaaatgtga
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