KEGG   Methanosarcina thermophila CHTI-55: MSTHC_1052
Entry
MSTHC_1052        CDS       T03891                                 
Name
(GenBank) Replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
mthe  Methanosarcina thermophila CHTI-55
Pathway
mthe03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHC_1052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthe03032]
    MSTHC_1052
DNA replication proteins [BR:mthe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSTHC_1052
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N AAA_16 Rad17 AAA_3 RCF1-5-like_lid AAA_14 AAA_assoc_2 Mg_chelatase AAA_2 AAA_5 TIP49 IstB_IS21 nSTAND3 TPR_11 ResIII AAA_24 AAA_18 bpMoxR
Other DBs
NCBI-ProteinID: AKB15370
UniProt: A0A0E3NER1
LinkDB
Position
complement(1314918..1315922)
AA seq 334 aa
MEDSTIKEEIWIEKYRPVRLDQVVGQEETIERLKSYVATRNLPHLLFSGPPGVGKTASAV
SIAREIFGEELWRENFTELNASDERGIDVVRTKIKNFAKTAPIGGAGFKIIFLDEADALT
PDAQSALRRTMERFSNNCRFILSCNYSSRIIEPIQSRCAVFRFRRLSEEAVRSRLEYIAK
DQGLSITEDGYEALIYVSQGDMRKAVNSLQAAAFIDPEKPISRETIYRTTATADPEDIRS
LIETALSGNFRLARKELNRLLYEEGLSGEDIIGQIYRAISEMDNRMILDLGLSERRIVEL
VDKVGEIDFRLTEGATEKIQLEALLAHFALSGAD
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggaggactctacgattaaagaagagatctggatcgaaaaatacaggcctgtcaggctg
gaccaggtggtagggcaggaagaaacaattgaacgcctgaaatcctacgttgcaacgaga
aatcttccccatctcctgttttcaggaccgcctggggtcggaaaaacagcctctgcagta
tcgattgcaagagaaatcttcggggaagagctctggcgtgagaactttaccgaactcaat
gcatcagatgaaagaggtattgatgttgtccggacgaaaattaaaaattttgcaaaaact
gcccctataggaggagctgggttcaaaattatctttctggatgaagccgatgcactgacc
ccagatgcccaatctgcactcaggcggacaatggagcgcttcagcaataactgccggttt
attctgtcttgcaattattcttccagaattatagagcctatccagtcccgctgtgcagtt
ttcaggttcaggcgcctttctgaagaggctgtcaggagccgccttgagtacatagctaaa
gatcagggtttatccattactgaagacggatatgaggctcttatttatgtatctcaggga
gacatgagaaaagctgtgaattctctccaggctgctgctttcatagatccagaaaagcct
atatccagggaaaccatttatagaactacagcaactgcagatcctgaggatatcagaagc
ctgatcgaaacggctctgagcgggaatttcaggcttgcgcgaaaggaactgaacaggttg
ctctatgaggagggtctttccggggaagatataattggacagatttacagggcaatctcg
gaaatggataaccggatgattctggatctcgggctttctgaaagacgcattgtcgaactc
gtagataaagtaggtgagatcgatttcaggctcactgaaggtgctactgaaaagatccag
ctcgaagctttactcgcacattttgcactctcaggtgcagattaa

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