KEGG   Methanosarcina thermophila CHTI-55: MSTHC_1388
Entry
MSTHC_1388        CDS       T03891                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mthe  Methanosarcina thermophila CHTI-55
Pathway
mthe03030  DNA replication
mthe03410  Base excision repair
mthe03420  Nucleotide excision repair
mthe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHC_1388
   03410 Base excision repair
    MSTHC_1388
   03420 Nucleotide excision repair
    MSTHC_1388
   03430 Mismatch repair
    MSTHC_1388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthe03032]
    MSTHC_1388
   03400 DNA repair and recombination proteins [BR:mthe03400]
    MSTHC_1388
DNA replication proteins [BR:mthe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSTHC_1388
DNA repair and recombination proteins [BR:mthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSTHC_1388
   MMR (mismatch excision repair)
    Other MMR factors
     MSTHC_1388
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSTHC_1388
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AKB15706
UniProt: A0A0E3KRC7
LinkDB
Position
1710702..1711439
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRIKIKPEGISVKAVDPANVAMGIFELGSSAFDEYS
ADESEIGIDLNKIMDLLGIAEKNDTVRMELEEGNQKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLDLPAKVVLNGADLRRAVKAAEKISDHLLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLADIVKPTNKVNEVSLSLGKDFPILIDFEIANGAGRISYLLAP
RIESE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgccgcattggctgta
attgtagatgaggtcagaattaaaataaagccggaaggtatttcggtaaaagctgttgat
cctgccaatgtcgcaatgggaatttttgagcttggatcatccgctttcgatgaatatagc
gctgatgagtctgaaataggaatagacctgaacaagattatggacctgctgggaattgcg
gagaagaacgacacagtccggatggaacttgaagaagggaatcaaaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacaattcgggcagaacca
agagttccccagctagatttgcctgcaaaagttgtcctgaatggagctgacctcaggcgt
gctgtgaaagctgcagagaaaataagtgatcatctactaatgggggtttctgatgatacc
ttctatatggaagcaaaaggcgatactgaccaggttcgcctggagatgggtagggaccag
ctgatcgacctgaaggcaggtgaagcctgttctcttttctctctggactatctggccgac
atagtcaaacctacgaataaagtcaatgaggtaagtctttcccttggaaaagatttcccg
atactcatagatttcgagattgcaaacggtgcaggcagaatttcttatctcctggctccg
agaattgagtcggaataa

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