Methanosarcina thermophila CHTI-55: MSTHC_1673
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Entry
MSTHC_1673 CDS
T03891
Name
(GenBank) Iron-dependent repressor IdeR/DtxR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
mthe
Methanosarcina thermophila CHTI-55
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthe03000
]
MSTHC_1673
Transcription factors [BR:
mthe03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSTHC_1673
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR
HTH_5
HTH_24
HTH_11
Rrf2
TrmB
MarR_2
PH0730-like_N
HTH_PafC
HTH_27
WHD_RNase_R
HTH_IclR
HTH_Crp_2
WHD_HrcA
DUF7343
GntR
HTH_20
wHTH-PRTase_assc
HTH_AsnC-type
TFIIE_alpha
HTH_45
DUF2250
HTH_Cmi2_C
AbiEi_4
Dimerisation
GerE
HTH_1
HTH_10
LexA_DNA_bind
HTH_micro
Rio2_N
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
AKB15991
UniProt:
A0A0E3L155
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All DBs
Position
2088763..2089428
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AA seq
221 aa
AA seq
DB search
MNIDRFEEYLETILYLIRKNKGPAKTKQISEELNVSPPSVTEMIKKLYSSGLVEYTPYQG
VELTEKGTDQAIKIKRKHQVLETFLVDVLDFDRRDAHKEACELEHAVSDAVLERLYKFLG
SPEYCPDGNPINLDKNNIRRDEKFIPLDEMEEGSSGKVARVALPKETKERLISLGILTGE
DIEVRRKQKQGCISVMAVGSEIVLGRDIAKKIFVSPKSKSV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgatagatttgaagaatatcttgagactatcctctatcttattagaaagaac
aagggacctgcaaagaccaaacagatctctgaagaactcaatgtatctccgccgagcgtg
acggagatgataaaaaagttatattcttcgggacttgtggagtatacaccttatcaagga
gtcgaattgaccgaaaaaggaactgaccaggctattaagattaaaagaaagcatcaggtg
cttgaaactttcctggttgacgtcctggatttcgataggagggatgcccataaagaagct
tgcgagcttgagcatgcagtatctgatgccgtacttgagaggctctacaagttccttgga
agtccagagtactgccctgatggaaaccctatcaatcttgacaaaaataacatcagacga
gatgagaagttcatcccacttgacgagatggaagagggaagttcaggtaaagtagcgcgg
gtagccctccccaaggaaacaaaggaacgtctgatctccctcggtattcttaccggagaa
gatattgaggtaaggcgcaagcaaaaacagggttgtatctcggtcatggcagtaggatca
gaaattgtccttggaagagacattgcaaagaaaattttcgtatctcctaaaagcaaaagc
gtgtaa
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