KEGG   Methanosarcina thermophila CHTI-55: MSTHC_1772
Entry
MSTHC_1772        CDS       T03891                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mthe  Methanosarcina thermophila CHTI-55
Pathway
mthe03030  DNA replication
mthe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHC_1772
   03410 Base excision repair
    MSTHC_1772
   03450 Non-homologous end-joining
    MSTHC_1772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthe03032]
    MSTHC_1772
   03400 DNA repair and recombination proteins [BR:mthe03400]
    MSTHC_1772
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mthe04147]
    MSTHC_1772
DNA replication proteins [BR:mthe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSTHC_1772
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSTHC_1772
DNA repair and recombination proteins [BR:mthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSTHC_1772
Exosome [BR:mthe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSTHC_1772
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AKB16090
LinkDB
Position
2201539..2202555
AA seq 338 aa
MGTDIGDLLQKRKAKLSDFANQVVAIDGFNALHQFLSIIRQRDGTPLIDSTGRVTSHLSG
LLYRTASLVEAGIKPLFVFDGKPPDLKSETLNKRKEVRESSWEKWESAKAAGDLKSAYKY
AQASSKVNEEIIEDSKYLLDIMGIPFVQAPCEGEAQAAHIVLKGDANCVASQDYDSFLFG
APVVVRNLAITGKRKLPGKNVYVDVEPEIIELEESLKALEITKEQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGDIYAVLREKGVEIEAVDRIREIFLHPEVTDNYEIKWGKPDSER
LFKFLCEDHDFSVDRVEKAVERLKATSGARQRTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcacagatataggcgacctgctccagaagagaaaagctaagctttcggattttgca
aaccaggtggttgcaattgatggttttaacgcactgcaccagtttttgagcattattcgc
cagcgggatggaactcctttgatcgattctacagggagagtaacctctcatctctcaggc
ttgctctaccggacagcaagccttgttgaagccgggatcaagcctctttttgtttttgac
ggcaagcctcctgacctcaagtccgaaactctgaataaaaggaaagaagtaagggaatct
tcatgggagaagtgggaaagcgcaaaggctgcaggagatttaaaatcagcttataagtat
gctcaggcttcttcaaaggtaaatgaggagatcattgaagattccaagtacctgcttgat
attatgggaattccttttgttcaggctccctgtgaaggagaagcgcaggctgcacatatt
gtgcttaaaggagatgcgaattgtgttgcatcacaggattatgattcctttcttttcgga
gctccggttgtcgtccggaatctggcaatcacgggaaaacgcaagcttcccggaaaaaac
gtctatgttgatgtcgagcccgagataattgagctggaagaatctctcaaagccctggaa
attaccaaggagcagctcatagatatagcaatatgtgtgggaacggattacaacaaagga
ctggaaaaggtaggtcctaaaacagcactcaaacttattaaaaagcatggagatatttac
gctgtgctccgtgaaaaaggggtggagatcgaagctgtggacagaatcagggaaattttt
ctccatcctgaagtaacggacaactacgaaataaagtggggtaagcctgactctgaaagg
ctcttcaaattcctttgtgaagatcacgacttctcggttgacagggtagaaaaagctgta
gaacggcttaaagcaacctccggagcccgacagaggacccttgaccagtggttttga

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