Methanosarcina thermophila CHTI-55: MSTHC_2235
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Entry
MSTHC_2235 CDS
T03891
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mthe
Methanosarcina thermophila CHTI-55
Pathway
mthe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSTHC_2235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthe03400
]
MSTHC_2235
Enzymes [BR:
mthe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSTHC_2235
DNA repair and recombination proteins [BR:
mthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSTHC_2235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKB16553
UniProt:
A0A0E3KS46
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All DBs
Position
2743877..2744710
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AA seq
277 aa
AA seq
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MSSKQLLFGTGGIPRSTKGTSSVLGIKRIRELDLDCMELEFVQGVRMSENGAKNVLEAAI
KEEVALSVHAPYYINLNSYEEEKLKASLERIYQAARIGSLCGAESIVLHAGFYQKSSKKQ
TFESVSKALRILTRQLQDEGIPAVLRPETMGKRTQFGTLEEVLELSAEIEGVMPCIDFCH
LHAREGKENSYQEFTKILSRVEECLGKEGLSNMHMHISGVEYGKNGEKKHLNLKESDFNY
PILMKTLKEFKTRGRVIIESPILEQDALMLKQLYNEI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaaacagctacttttcggtaccggagggattccaagaagcacaaaaggaaca
agcagcgtcttgggaattaaacggataagagaacttgatcttgactgtatggagcttgaa
ttcgttcagggcgtgcgcatgagcgaaaatggggcaaaaaatgttctggaagcggcaata
aaagaagaagtagccttgagtgtccatgccccttactatatcaacctgaactcttacgaa
gaagaaaaattaaaagcaagccttgagaggatctaccaggctgcaaggataggcagccta
tgcggggcagaatccattgtgttgcacgcaggtttctatcagaaaagcagcaaaaaacaa
acctttgagagcgtctcaaaagccctgagaatacttaccaggcagcttcaggatgaagga
attcctgcagtcctgcgccctgaaactatgggcaagcgtacccaatttggaacactcgaa
gaagtgcttgagctaagtgcagaaatcgaaggagttatgccctgcattgatttttgccat
ttgcacgcaagggaaggaaaggagaactcctaccaggagtttacgaaaattctctcccga
gtcgaggaatgcctcggaaaagaagggctttcaaatatgcacatgcatatctcaggcgtg
gaatacggcaagaatggggaaaagaagcatctgaaccttaaagaatcagactttaattac
cccatacttatgaaaactttgaaagaattcaaaaccagagggcgggtaataattgagagc
cctattcttgagcaggacgcacttatgttgaagcaactttacaatgagatatga
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