Methanosarcina thermophila CHTI-55: MSTHC_2298
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Entry
MSTHC_2298 CDS
T03891
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
mthe
Methanosarcina thermophila CHTI-55
Pathway
mthe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSTHC_2298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthe03019
]
MSTHC_2298
03016 Transfer RNA biogenesis [BR:
mthe03016
]
MSTHC_2298
03012 Translation factors [BR:
mthe03012
]
MSTHC_2298
04131 Membrane trafficking [BR:
mthe04131
]
MSTHC_2298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthe04147
]
MSTHC_2298
Messenger RNA biogenesis [BR:
mthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSTHC_2298
Transfer RNA biogenesis [BR:
mthe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSTHC_2298
Translation factors [BR:
mthe03012
]
Eukaryotic type
Elongation factors
MSTHC_2298
Membrane trafficking [BR:
mthe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSTHC_2298
Exosome [BR:
mthe04147
]
Exosomal proteins
Proteins found in most exosomes
MSTHC_2298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
SpoIVA_ATPase
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKB16616
UniProt:
A0A0E3L1P2
LinkDB
All DBs
Position
complement(2813634..2814902)
Genome browser
AA seq
422 aa
AA seq
DB search
MAAEKPHLNLAVIGHIDHGKSTFVGRLMYDAGAVPPHIIEKYKEEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPD
GVMAQTKEHIFLSRTLGINQLIVAINKMDAANYDEKRYKEVVEQVSGILKMIGYKPNEIP
FIPVSAFFGDNVLNRSDKTPWYNGPTMMEALNNLKEPEKPSNLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVIFMPGGASGEVKSIEMHHEEIPQAVPGDNIGWNVRGIGKNDVR
RGDVCGHVDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTAQIACQLIQLNKKLDPK
TGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaaaaccacacttgaacttagcagtgattggtcacatcgaccatggaaaa
tcaacatttgtaggacgcttaatgtatgatgcaggagctgtacctccacacatcattgaa
aaatacaaggaagaagcaaagcagaagggtaaagaatctttcgcctttgcatgggttatg
gactctcttaaggaagagcgtgaaagaggtattacaattgacatcgctcacaagagattc
gacaccgaaaagtactacttcacagttgtagactgccctggtcaccgtgacttcgttaag
aacatgatcacaggtgcctcccaggctgatgcagctgtccttgtcgttgcagctcccgat
ggcgtaatggctcagaccaaggaacacattttcctttccagaaccctcggtatcaaccag
cttattgtcgcaatcaacaaaatggatgcagcaaattacgacgagaagagatataaggaa
gtagtcgagcaggtttccggtatccttaagatgatcgggtacaagccaaacgaaattccc
ttcattccagtctccgcattcttcggtgacaacgttcttaatcgcagcgacaagaccccc
tggtacaatggtccaaccatgatggaagctcttaacaaccttaaagagccagaaaaacca
tccaaccttccactcaggatccctgtcgaagatgcatacaccatttcaggtatcggaact
gtaccagtaggcagagttgaaaccggtgtcatgaagaagggtgacaaggtcatcttcatg
cctggcggagcatccggtgaggttaagtccattgagatgcaccacgaagaaattccacag
gcagtccccggagacaacataggctggaacgtccgtggtatcggcaagaacgatgtccgc
agaggagacgtttgtggtcatgttgacaacccaccaaaggttgccgatgagtttgtagga
cagattgttgttctgcagcacccctccgcaatcactgccggatacactccagtattccac
gcccacaccgcccagatcgcatgccagctaattcaacttaacaagaagctggacccgaag
accgggcaggttaaggaagaaaacccaaccttcctcaaagcaggagatgcagcaatcgtt
acaatcaaaccgacaaagccgatggttattgagcccgtaaaagaaattccacagctcggc
aggttcgctatccgtgatatgggtatgaccattgctgccggcatgtgcatgagtgttaaa
cagaaataa
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