Methanosarcina thermophila CHTI-55: MSTHC_2360
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Entry
MSTHC_2360 CDS
T03891
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mthe
Methanosarcina thermophila CHTI-55
Pathway
mthe03410
Base excision repair
mthe03430
Mismatch repair
mthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSTHC_2360
03430 Mismatch repair
MSTHC_2360
03440 Homologous recombination
MSTHC_2360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthe03400
]
MSTHC_2360
DNA repair and recombination proteins [BR:
mthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSTHC_2360
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSTHC_2360
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSTHC_2360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB16678
UniProt:
A0A0E3KS98
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All DBs
Position
complement(2895430..2896428)
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AA seq
332 aa
AA seq
DB search
MKELQSRLKTKTLVLTHGDSDGICSGAIAKTAYPDAYVYFTSPVNLLEKLRLIEDVRNLI
ICDIAIDERNCSELYTMLCRFAKKCNLYYIDHHPLPKSCIKESWFYHESEACSSELTYRL
FEKRLNRDMRRVAIYGAIGDFCDNTEHVKSWIKDWDKRNLYFQAGTLTQAILYKGKEYEF
KRSLIEPLSKDIIPSNVPELLELAREAAINEEKIRLFVKENVKTLRNCAYIVNSNNSISK
AAIYAASYGRRNVGIAAEYRERKEAYDLSIRSRGEVDVNRILRSVAPKFGGSGGGHPLAA
GARIPENSLYIFLRAFDKELGEANEAEDNGNK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactgcagagccggcttaaaacaaaaactctagtgcttacccatggggactcg
gatggaatctgttcgggtgcgattgcaaaaactgcttatccggatgcttatgtatatttt
acaagtccagttaaccttcttgagaagttaaggcttattgaggatgtgagaaacctaatt
atctgcgatatcgcaatagatgagaggaactgctctgagctttatacaatgctttgcagg
tttgcaaaaaaatgcaacctttactatattgaccatcaccctctcccgaagagctgtata
aaagaaagctggttttaccatgagtctgaagcctgttcctcagaactaacctacaggctt
tttgaaaagcgcctgaacagggatatgcggagagtagccatatatggagctataggggac
ttttgcgacaacaccgagcatgtaaaaagctggattaaagactgggataaaagaaacctt
tacttccaagctggaactctgacccaggctatcctttataaaggaaaagagtacgaattc
aaaagaagcctgatcgaacccctctcaaaggatattattccctcaaatgtccctgaactg
cttgagctcgcaagggaagctgctatcaatgaggagaagataaggctttttgttaaggaa
aacgtgaagaccctgagaaattgtgcgtatattgtaaatagcaataattccatttcaaaa
gcagcaatttacgcagcctcctatggcaggcgtaatgttgggattgctgctgaataccgt
gagagaaaggaagcttacgacctgagcatccgctcgcggggagaggtcgatgtaaaccgt
attctccgctcagtcgctcccaagttcgggggaagcggtggaggtcaccctcttgcggca
ggtgctcgaatcccggaaaattccctttacatattcctcagagcttttgataaggaactc
ggagaggcaaatgaagcagaagacaatggaaataagtaa
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