Mixta theicola: C7M52_00460
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Entry
C7M52_00460 CDS
T06402
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mthi
Mixta theicola
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mthi03009
]
C7M52_00460 (srmB)
Enzymes [BR:
mthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M52_00460 (srmB)
Ribosome biogenesis [BR:
mthi03009
]
Prokaryotic type
rRNA helicases
C7M52_00460 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_11
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHM74524
LinkDB
All DBs
Position
complement(483463..484812)
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AA seq
449 aa
AA seq
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MTATTFSELELDESLLDALQDKGFSRPTAIQAEAIPAALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAQELAKHTQLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEGIKDFAERLLNEPVEIDSDPSRRERKKIQQWYYRADDIVHKTKLLV
HLLKQPEATRSIVFVRKRERVHELVGWLREAGIQASYLEGEMVQAKRNEALKRLMDGRVN
VLVATDVAARGIDVDDVSHVFNFDLPRTADVYLHRIGRTGRAGRKGTALSLVEAHDTLLL
EKISRYISEPLKARTIDELRPVTRAPSQKLKGKPSKKVLAKRKEKEKKKEEEKKPRVKVR
HRDRKNIGKRRKPSAAGNGASENKNENAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccacattttccgaactcgaacttgatgaaagcctgctggacgctctgcag
gataaaggcttttcccgccccaccgctattcaggccgaagcgatccccgccgcgctggat
ggacgcgacgtgctgggttcagcaccaaccgggaccgggaaaacggctgcctacctgttg
ccggcgctacagcatctgctggactttccgcgtaaaaaatcagggccgccgcgcgtgctg
attctgacgccgacgcgcgagctggcaatgcaggtggccgatcaggcgcaggagctggca
aaacatactcagctggatatcgcaacgatcaccggcggcgtggcctatatgaaccatgcc
gaagtgttcagtgaaaaccaggatgtggtggtcgccaccacggggcgcctgttgcagtac
atcaaagaagaaaacttcgactgccgggccgtagaaattttgatcctcgacgaagcggat
cgcatgctggatatgggctttgcccaggatatcgaaaccatcgccgccgagacgcgctgg
cgtaaacagacgctgctcttctccgccacgctggaaggcgaaggcattaaagattttgcc
gagcgtctgctgaacgaaccggtagagatcgattccgatccctcgcgccgcgagcgtaaa
aaaatccagcagtggtactatcgcgcggatgatatcgtccataaaaccaaactgctggtg
catctgctgaagcagccggaagcaacccgctcgatcgtattcgtgcgcaaacgtgagcgc
gtgcatgagctggtcggctggctgcgcgaagccggcatccaggcaagctacctggaaggc
gaaatggtgcaggcgaagcgtaacgaagcgctgaagcgcctgatggacggacgcgttaat
gtgctggtagcgaccgacgttgccgcgcgcggcatcgacgttgatgatgtcagccacgta
ttcaacttcgatctaccgcgtaccgcagacgtttatctgcaccgtatcggacgtaccgga
cgcgccggacgcaaaggcaccgcgctgtcgctggtggaggcgcatgataccttgctgctg
gaaaaaatcagccgctatatcagcgagccgcttaaggcgcgcaccattgatgaactgcgc
ccggtcacgcgcgcgcccagtcagaagctaaaaggcaagccgtcgaaaaaggtactggcg
aaacgtaaagaaaaagagaagaaaaaagaagaagagaaaaaaccgcgcgttaaggtgcgc
catcgcgaccggaaaaatatcggtaagcgacgtaagccttccgcagcaggcaacggcgcc
agcgaaaataagaacgagaacgctgaataa
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