Mixta theicola: C7M52_00957
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Entry
C7M52_00957 CDS
T06402
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mthi
Mixta theicola
Pathway
mthi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C7M52_00957 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthi03400
]
C7M52_00957 (sbcB)
Enzymes [BR:
mthi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C7M52_00957 (sbcB)
DNA repair and recombination proteins [BR:
mthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C7M52_00957 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7M52_00957 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7M52_00957 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QHM75013
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All DBs
Position
complement(1090716..1092143)
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AA seq
475 aa
AA seq
DB search
MADKQKQPTFLFHDYETFGKSPALDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQQARARGVNEAEFARRIHALFTVENTCVVGYNNVRFDDEVTRNIFYRNFF
DPYAWSWQNGNSRWDLLDVMRACYALRPDGIHWPENEDGLPSFKLEHLTKANGVEHSHAH
DAMSDVYATIAMAKLVKTKQPKLFEFLFRHRSKQKINTLIDIPQMKPLVHISGMFGALRG
NTSWIAPLAWHPENRNALIVCDLAGDMAPLLELDADALRARLYTPRQQLGEASAVPIKLV
HSNKCPVLAPASTLRPEDAERLGIDRQRCLDNLRLLRQHPEVREKVVALYAEAEPFIPSE
DVDAQLYNGFFSDADKTAMGIIQQATPANLPALDLTFNDQRIEKLLFRYRARNFPGTLDD
SEQQRWLQHRRETLNGERIEAFLLELESLANLHEGDKDKMAQLKALYDYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaagcaaaagcaaccaaccttcctgttccatgattatgaaaccttcggcaag
agtccggcgctcgatcgcccggcgcagtttgccggtattcgtaccgatatggattttaat
atcatcggcgaaccggaggtgttttactgccagcctgcggatgattacctgcctcaaccg
gaagcggtaatgattaccggcattacgccgcagcaggcgcgggcgcgcggcgttaacgaa
gcggaattcgctcgccgcattcacgccctgtttaccgtcgagaacacctgcgtggtggga
tataacaacgtgcgtttcgatgatgaggtaacgcgcaatatcttttaccgcaacttcttc
gatccttacgcctggagctggcaaaacggcaactcacgctgggatctgctggatgtgatg
cgcgcctgctatgccttacgccctgacggcatccactggccggaaaacgaggacgggctg
cccagcttcaagctggagcatctgacaaaagcgaacggcgttgagcacagtcacgcgcac
gatgcgatgtcagacgtctacgccactatcgccatggcgaagctggtgaaaactaaacag
ccgaagctgtttgaattcctgttccgccaccgcagcaagcagaagatcaatacgctgatc
gatattccacaaatgaagccgctggtgcatatctccggcatgtttggcgcgctgcgcggc
aataccagctggatcgccccgctcgcctggcatccggaaaaccgcaacgcgctgattgtc
tgcgacctggccggagatatggcgccgctgctggagctggatgccgacgcgctgcgcgca
aggctctatacgccgcgccagcagctgggcgaggcgtcagcggtgccgatcaaactggtg
cacagcaataagtgcccggtactggcgcccgccagtacgctgcgcccggaagatgcagag
cgtttgggaatcgatcggcagcgctgtctggataaccttaggctgctgcgtcagcatccg
gaagttcgcgaaaaggtggtggcgctttacgctgaggccgaaccctttattccctccgaa
gacgtggacgcccagctttacaacggctttttcagcgatgctgataaaaccgcgatggga
attatccagcaggcaacgccggcaaacctgcccgcgcttgatttaacctttaacgatcaa
cgcatcgagaagctgctgtttcgctaccgtgcgcgtaacttccccggcacgctggatgac
agcgagcagcagcgctggctgcagcatcgtcgcgagacgctgaacggcgagcgtatcgaa
gcgtttctgctggagctggaatcgctggctaatctgcatgagggcgacaaagataaaatg
gcgcagctaaaggcgctgtatgattacgctcgcgaattagtctcataa
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