Mixta theicola: C7M52_01342
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Entry
C7M52_01342 CDS
T06402
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mthi
Mixta theicola
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthi03016
]
C7M52_01342 (rnb)
Enzymes [BR:
mthi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C7M52_01342 (rnb)
Transfer RNA biogenesis [BR:
mthi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C7M52_01342 (rnb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
QHM75389
LinkDB
All DBs
Position
complement(1499499..1501430)
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AA seq
643 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAALQTDKDREIVEPETLVEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIQCRPARGLQH
DFQAGDWAVAEMRRHPLKGDRSFYAELTEFITTGDDHLAPWWVTLSRHNLEREAPAVNFS
EMLDEQLEREDLTALDFVTIDSASTEDMDDALFVEELDDNALRLTIAIADPTAYVSADSE
LDAIAAERAFTNYLPGFNIPMLPRELSDDVCSLRPNERRPALACRVNVAQDGTLSGIHFF
AAWVESKAKLVYDEVSDWLENSGEWQPSSEAIARQIRLLHRICQARVAWRQQHALVFKDR
PDYRFLLGEKGEVLDIVAEPRRIANRIVEEAMIAANICAAIVLREKLGFGIYNVHLGFDA
ANAEQAAAVLAHHGITADAAAMATLEGFRQLRRQLDAQPTQFLDSRIRRFQSFAEISTEP
GPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIRGESASRPADEVTLKMGERRRLNRMA
ERDVGDWLYARFLQKAAGSDTRFSAEIIDISRGGMRVRLLDNGAVAFIPAPFIHAVRDEL
VCSQENGTVQVKGEVVYRVTDVIEVTIAEVRMETRSIVARPAA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgcttgcgcagcttaaagagaagcttcatgcccagacgccg
cgtgtggaaggggtggtaaaaggcaccgaaaaaggtttcggtttcctcgaagtcgatgca
caaaaaagctactttattccgccgccgcagatgaagaaagtgatgcatggcgaccgggtg
attgccgcgctgcaaaccgataaggatcgcgaaatcgttgagccggaaacgctggtagag
cctttcctgtcgcgtttcgtcggccgggtacagaaaaaagacgatcgtctgtcaatcgtg
cccgatcatccgctgctgaaggacgccattcagtgccgtccggcgcgtggtctgcagcat
gactttcaggcgggtgactgggcagtggcggaaatgcggcgtcatccgttaaaaggcgac
cgcagcttttacgctgagctgacggaatttatcaccaccggcgacgatcacctggcgccg
tggtgggtgacactgtcacgtcacaatcttgaacgcgaagcgccggcggttaacttcagc
gaaatgctggatgaacagctggagcgtgaagatcttaccgcgctggattttgtcactatc
gacagcgccagcacggaagatatggacgatgcgctgtttgtcgaagagctggacgataac
gcgctgcgcctgaccatcgccatcgccgatcctaccgcttatgtgtcggccgacagcgag
ctggacgccatcgccgccgagcgcgccttcactaactatctgccgggctttaatatcccg
atgctgccgcgcgagctttctgacgatgtctgctcgctgcgcccgaacgaacgccgtccg
gcgctggcctgccgcgttaacgtagcccaggatggcacgctgtccggtatccacttcttt
gccgcctgggtcgaatccaaagctaagctggtttatgacgaagtatccgactggctggaa
aacagcggcgaatggcagccgtcgagcgaagcgattgcccggcagatccgtctgctgcac
cgcatttgccaggcgcgcgtggcgtggcgccagcagcatgcgctggtgtttaaagatcgc
ccggactatcgcttcctgctgggcgaaaaaggcgaagtgctggatatcgttgccgagccg
cgccgcatcgctaaccgtatcgttgaagaggcgatgatcgccgccaatatctgcgccgcg
atagtgctgcgcgagaagctcggcttcggcatctataacgtgcatctgggctttgacgcc
gctaacgccgaacaggccgccgccgtactggcgcatcacggcatcaccgccgacgccgcc
gcgatggccacgctggaaggcttccgccagctgcgtcgtcagctggatgcgcagccgacg
cagttcctcgacagccgcattcgccgcttccagtcctttgcggaaatcagcaccgaaccc
ggcccgcacttcggcctcggcctggaggcttacgcaacctggacttcaccgattcgtaag
tatggcgatatggtcaaccatcgcctgctgaaggcgattattcgcggggagagcgcgtcg
cgccctgccgatgaagtcacgctgaaaatgggcgagcgccgtcgcctgaaccgcatggcc
gagcgtgacgtcggcgactggctctatgcgcgcttcctgcaaaaggcggcgggcagcgat
acccgcttcagcgctgagattatcgatatctcccgcggcggtatgcgtgttcgcctgctg
gataacggcgccgttgcctttatcccggcgccctttatccacgcagtgcgcgatgaactg
gtatgcagccaggaaaatggcacggtgcaggtaaaaggcgaagtggtttaccgcgtaacc
gatgtgattgaggtaactatcgccgaagtgcgtatggaaacccgcagcattgtggcgcgc
ccggcagcctga
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