Mixta theicola: C7M52_02111
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Entry
C7M52_02111 CDS
T06402
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mthi
Mixta theicola
Pathway
mthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M52_02111 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthi03019
]
C7M52_02111 (rhlE)
Enzymes [BR:
mthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M52_02111 (rhlE)
Messenger RNA biogenesis [BR:
mthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7M52_02111 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHM76148
LinkDB
All DBs
Position
complement(2365795..2367267)
Genome browser
AA seq
490 aa
AA seq
DB search
MSFDSLGLNADILRAVAEQGYREPTPIQSQAIPMVLEGRDLMASAQTGTGKTAGFTLPIL
QLLNAKPQPAKGRRPVRALILTPTRELAAQIGENVRDYSKYLDLRSLVVFGGVSINPQMM
KLRGGVDLLVATPGRLLDLAHQNAVDLSKVEMLVLDEADRMLDMGFIHDIRRVLARLPAK
RQNLLFSATFSDEIKTLAEKLLDNPSQVAVARRNTASEQVTQHVHFVDKKRKRELLSLMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKGGQIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREVPRMALPGFEPDPSIKAEPIQNGRQQRGGGGRSQGGRGQNGDRSSAQRQSTAG
DRSSAQRHSASGERQPRRSASEGNVSRRPSGENGAARRSAGEGAPSRRLSGDRSGQRSAR
PRSDKPAGNR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattctctcggcctgaacgccgatattttgcgtgcggttgccgagcaaggc
tatcgtgagcctacccccatccagagccaggcgatcccgatggtactggaaggtcgcgat
ttgatggccagcgcccagaccggcaccggcaaaaccgcaggcttcaccctgccgatcctg
cagctgctgaatgcgaagccgcagccggcaaaagggcgtcgcccggtacgtgcgctgatt
ctcactccaacgcgcgagctggcggcgcagatcggcgaaaacgtgcgtgactacagcaaa
tacctcgacctacgttcgctggtggtattcggcggcgtcagcattaacccgcagatgatg
aaactgcgcggcggcgtcgatctgctggtggcaacgccgggacgcctgctcgatctggcg
catcaaaacgccgtcgatctctctaaagttgagatgctggtgctggatgaagcagatcgt
atgctcgatatgggctttattcacgatatccgccgcgtgctggcgcgcctgccggcgaaa
cgtcagaacctgctgttctcggcgaccttctctgacgaaatcaaaacgctggcggaaaaa
ctgctggataaccccagccaggttgcggtggcgcgccgcaacaccgcctcggagcaggta
acccagcatgtgcattttgtggataaaaaacgcaaacgcgagctgctgtcgctgatgatc
ggccagggcaactggcagcaggtgctggtattcacccgcaccaaacacggcgccaatcac
ctggctgaacagctgaataaagatggcatcaccgccgccgcgattcacggcaataaaagc
cagggcgcgcgtacccgtgcgctgagcgattttaaaggcgggcagattcgcgtgctggtg
gcgaccgatattgccgcgcgcggccttgatattgaagagctgccgcacgtagtgaactac
gagctgcctaacgtaccggaagattatgtgcaccgtatcggacgtaccggacgcgcggcg
gccaccggcgaagcgctgtcgctggtctgcgttgatgagcataagctgctgcgcgatatt
gaacgtctgctgaagcgcgaagtgccgcgtatggcgctgccgggctttgagccggatccc
agcatcaaagcggaaccgattcagaatgggcgccagcagcgcggcggcggcggacgcagt
cagggcggacgcggtcagaacggcgatcgttcatcagctcagcgtcagtcgacggcaggc
gatcgctcgtcggctcagcgtcactctgcctccggcgagcgccagccacgtcgtagcgcg
agcgaaggcaacgtatcgcgccgtccgtcaggtgaaaacggcgcagcccgtcgtagcgcc
ggcgaaggcgcgccgtcgcgtcgcctttccggcgatcgcagcggccagcgctcagcgcgt
ccgcgcagcgataagcccgccggtaaccgctga
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