Mixta theicola: C7M52_02377
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Entry
C7M52_02377 CDS
T06402
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mthi
Mixta theicola
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthi03400
]
C7M52_02377 (sbcC)
DNA repair and recombination proteins [BR:
mthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7M52_02377 (sbcC)
Archaeal homologous recombinant proteins
C7M52_02377 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
AAA_21
ABC_tran
SMC_N
cobW
NTPase_1
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QHM76401
LinkDB
All DBs
Position
2630848..2634531
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRFKNINSLRGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETSR
LGKISQTQNELISRDTAECLAEVEFEVRGEAWRAFWSQNRARGAVDGNLQAPRVELARCK
DNVIVADKVKDKLEMITQLTGLDFARFTKSMLLSQGEFAAFLNAAANDRAELLEELTGTE
IYGQLSARIFEQHKLARIELDRLRARAAGMALLEAPARQQLEESLQALTQQEQALQLRLA
LTRQQQQWLSQQQRLEQEKQQAEAAQRQAESEWQQAEPTRQRLKRAEPAEKLRPLWQQRQ
QLRQDLQQLQQQAQQLSASLQQASEQLHTLQHQQSQAEQENQRLHEAWRQQENLINERVI
PLDHQIDTLAQQVALQQQSLDENQQAQQQRQQRQRQLSQQQQALLAQQAQEQRWRSDNAQ
VADWGERLGGWRERLQRQQQSQHHLQALEEKQRQQQRLQDEQQRQLAALKAQSAPQENEL
ERAHQQVTQAEQALTVLQQRQPEAALRLQLERQQQQRPLRQKLAICFSTLRPLRQRHAQQ
QLELQALDEQIRHQTQQLEQQRQAWREKHQHRLDLEKRLELEQRIISLEQERARLIAGEP
CPLCGATEHPAVEHYQTLTLTENQQRLEAIRQHEDRLRLAGVACSEQLKALQQQQQRLSG
QQQTLSAELTRQLDEWQTLLAAAGLTLAPEEENGLNDWIAQQEAQEAELQQQLQQQEHAA
RRLQQAKEQLAACRQRWQQQQQAQQLAQQQLSHLQQQLQEQEQQHQQLRQEQQQLSAALE
QELTQHQLTLPEPEPEALQRWLDARQNEWRRWQESEQLLADLSARLAACETALRSVNDEL
AQLAEQRQRADKLAQSQQQQLLELRQQRHQLLGDERVAEVRQQWQQRLQQAEARYRERQQ
RWQQGQDGLNNLTGQHNSLIQQQDAAEKRYIACETQFIQALTQSDFSDEAAFHAALLDEQ
EAQQLRATSQQAEARRQQTGALAQQAQARLAQHQQARPADISATLPELERELATLEHELQ
ANARQQGQLRQQLESDDTQRQQQQSLLRRIEDNAQQVEDWGYLNQLIGSSSGDKFRRFAQ
GLTLDHLVWLANQQLERLHGRYLLQRKAADTLELQVMDTWQADAQRDTRTLSGGESFLVS
LALALALSDLVSDKTRIESLFLDEGFGTLDADTLDTALDALDALNASGKTIGVISHVEAM
KERIPVQIKVRKVNGLGYSRLDRQFSV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattttatccctgcgctttaaaaacattaattcgctgcgcggcgagtggaaaatc
gactttacgcgcgagccgttcgccagcaacggtctgttcgccataaccggcccgaccggc
gccgggaaaaccaccctgctcgacgctatctgcctggcgctctaccacgaaacctcgcgg
ctggggaaaatctcccagacgcaaaacgaactgattagccgcgatacggcagagtgcctg
gcggaagtggagtttgaagtcaggggcgaagcctggcgcgccttctggagccagaaccgc
gcgcgtggcgcggtggacggcaatttgcaggcgccgcgcgttgagctggcgcgctgtaaa
gacaacgtcatcgtggccgacaaagtgaaagataagctggagatgattacccagctgacc
gggcttgattttgcccgctttaccaaatcgatgctgctctcgcagggagagttcgccgcc
tttctgaatgccgctgccaacgatcgcgccgaactgctggaggagctgaccggcacggag
atttacggacagctttcggcgcgtatttttgagcagcataagctggcgcgcattgagctg
gatcggctgcgggcgcgcgcggcgggcatggcgctgctggaagctccggcgcgtcagcag
ctggaggaatcgcttcaggcgctgacgcagcaggagcaggcgctgcagctgcggttagcg
cttactcgccagcagcagcagtggctcagccagcagcagcggctggagcaggaaaaacag
caggcggaggcggcgcaacgtcaggcagagagcgagtggcagcaggcggagccgacgcgg
cagcggctgaaacgggcggagccggcggaaaaactacgcccgctctggcagcagcgccag
cagctacggcaggatctgcaacagctacagcagcaggcgcagcagctttccgcctcgctg
cagcaggctagtgagcagctacacaccttgcaacaccagcaatcgcaggcggaacaggaa
aatcagcggctgcatgaggcgtggcgtcagcaggagaatctgattaatgaacgggttatt
ccgctcgaccatcagatcgatacgctggcgcagcaggttgccctgcagcagcagagcctg
gatgagaatcagcaggcgcagcagcagcgtcagcaacgccagcgccagctcagccagcag
cagcaggcgctgttggcgcagcaggcgcaggaacagcgctggcgcagcgataacgctcag
gtagccgactggggcgaacggctgggcggctggcgcgaacgattacagcggcaacagcag
tcgcagcatcacctgcaggcgctggaggagaaacagcgccagcaacagcggctacaggat
gagcagcagcgccagctggcggcgctgaaggcgcaatccgctccgcaggaaaacgagctg
gagcgcgcacatcagcaggttactcaggctgagcaagcgcttactgtcttacagcagcgg
cagccggaagcggcgctgcgactgcagctggagcgccagcagcagcagcgtccgctgcgg
caaaagctggcgatttgcttttccactctgcgtccgctgcgccagcgccacgcccaacag
cagctggagctgcaggcgctggacgaacaaatccggcatcaaacgcagcagctggagcag
cagcgccaggcctggcgggaaaaacatcagcaccgcctcgacctggaaaagcgcctggag
ctggagcagcgcattatcagcctggagcaggaacgggccaggctgattgccggcgagccc
tgcccgctgtgcggcgcgaccgagcatccggcggtagaacattatcaaaccctgacgctg
acggaaaaccagcagcggctggaggcgatacgccagcatgaagatcggctgcgtctcgcc
ggcgtggcctgcagcgaacagctgaaagcgttgcagcaacagcagcaacggctgagcggg
cagcagcagacgctaagcgccgagctaacgcgtcagctggacgagtggcaaacgttgctg
gccgccgccggcctgacgctggcgccggaagaggaaaacggcctcaacgactggatcgct
cagcaggaggcgcaggaggcggagctgcagcagcagctgcaacagcaggagcatgccgcc
cgcaggctgcaacaggcgaaagagcagctggcggcctgccggcagcgctggcagcagcag
cagcaggcgcaacagctggcgcaacagcagctgagccatctgcagcaacagctgcaggaa
caagagcagcagcatcagcagctgcggcaggaacagcagcagcttagcgccgcgctggaa
caggagctgacgcagcaccagctaacgctgccggagccggagccggaggcgttgcagcgc
tggctggacgcgcgtcaaaacgaatggcggcgctggcaggaaagtgagcagctgcttgcc
gatctgtcggcgcggctggcggcgtgcgaaaccgcgttacgcagcgttaacgatgagctg
gcgcagctggcggaacagcgccagcgtgccgacaaactggcgcagtcgcaacagcagcag
ctgcttgaattgcgccagcagcgccatcagctgctgggcgatgagcgcgtagcggaggtg
cgccagcagtggcagcagcgtctgcagcaggccgaagcgcgctaccgcgaacggcaacag
cgctggcagcaggggcaggatggcttaaataacctgaccggacagcataattcactaatt
caacagcaagacgccgctgaaaagcgctatatcgcatgtgaaacccagtttattcaggcg
ctgacgcagagcgacttcagcgatgaagccgcctttcatgccgcgctgctggatgaacag
gaggcgcaacagctgcgcgcaacaagccagcaggcggaggcgcgccgtcagcagacgggt
gcgctggcgcagcaggcgcaggcgcggctggcgcagcatcagcaggcgcggcccgccgat
attagcgccacgctgcccgaactggagcgcgagctggcaacgctggagcatgagctgcag
gccaacgcgcgccagcagggtcagctgcgccagcagctggagagcgacgatacgcaacgt
cagcagcagcaaagcctgctgcggcggattgaagataacgcgcagcaggtagaggactgg
ggctaccttaatcagctgatcggctccagcagcggcgataagttccgccgcttcgcccag
ggcctgacgctggatcatctggtctggctggcgaaccagcagcttgaacgcctgcacggt
cgttatctgctgcagcgcaaagccgccgataccctggagctacaggttatggatacctgg
caggccgacgcgcagcgcgatacgcgcaccctctccggcggcgaaagcttcctggtcagc
ctggcgctggcgctggcgctctccgatctggtcagcgataaaacccgtatcgaatcgctg
tttctggatgagggcttcggcacgctggatgcggatacgctcgataccgcgctggacgcg
ctggatgcgctcaacgccagcgggaaaactatcggcgttatcagtcacgttgaggcgatg
aaggagcgtattccggtgcagattaaggtcaggaaggtaaacggcctcggctacagccgg
ctggatcggcaattttcagtctga
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integrated database retrieval system
