Mixta theicola: C7M52_02968
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Entry
C7M52_02968 CDS
T06402
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mthi
Mixta theicola
Pathway
mthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M52_02968 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthi03019
]
C7M52_02968 (pnp)
03016 Transfer RNA biogenesis [BR:
mthi03016
]
C7M52_02968 (pnp)
Enzymes [BR:
mthi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C7M52_02968 (pnp)
Messenger RNA biogenesis [BR:
mthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7M52_02968 (pnp)
Transfer RNA biogenesis [BR:
mthi03016
]
Prokaryotic type
tRNA degradation factors
C7M52_02968 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
UPF0181
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QHM76981
LinkDB
All DBs
Position
complement(3316394..3318523)
Genome browser
AA seq
709 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMASMDDTAVFVTVVGQKKAKAGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTSDEIKQSRLDLVVA
GTQGAVLMVESEADILSEEQMLGAVVFGHEQQQVVIENINSLVAEAGKPRWDWQPEAANE
ALNARIAALAEARLSDAYRITEKQQRYAQVDLIKSETTAALLAEDETLDEGEISDILHAI
EKNVVRSRVLNGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVAATLGTAR
DAQSLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKLDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDRYVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISTPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEASEQQPQAETAAATPEAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgattgtacgtaaattccagtacggccagcataccgtgacgctggaaacc
ggtatgatggcacgtcaggctactgcggccgttatggccagcatggatgataccgccgta
tttgtaactgttgtcggccagaaaaaagcgaaagccggccaggatttctttccgctgacc
gtaaactaccaggagcgtacctacgctgccggtcgtattccgggcagtttcttccgtcgt
gaaggccgtccgagcgaaggcgaaacgctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttccctgaaggcttcgttaacgaagttcaggttatcgctaccgtggtatcggta
aacccgcaggttaacccggatatcgtggcgatgatcggcgcctctgcggcgctgagcctc
tccggcattccgttcaacggccctatcggcgccgcgcgcgttggctatatcaacgatcaa
tatgtgctgaacccgacttccgatgagattaaacagtcccgtctggatctggtggttgcc
ggtacgcagggcgcggtgctgatggtggaatccgaagcggatatcctctctgaagagcag
atgctgggcgcggtagtgttcggacacgaacagcagcaggtagtgattgaaaacatcaat
tcgctggttgccgaagcgggtaaaccgcgctgggactggcagccggaagccgctaacgaa
gcgctgaacgcgcgtatcgcggcgctggcggaagctcgcctgagcgatgcttatcgcatc
accgaaaaacagcagcgctatgcgcaggttgatctgattaaatcagaaaccaccgccgcg
ctgctggcggaagatgaaacgctggatgaaggtgaaatcagcgacatcctgcacgccatc
gagaaaaacgttgtgcgtagccgcgtactgaacggcgagccgcgtatcgacggacgcgaa
aaagatatgatccgcggtctggacgttcgcaccggcgtgctgccgcgtacgcacggttcc
gcgctgtttacccgcggcgaaacgcaggcgctggttgccgcaacgctgggtaccgcgcgt
gacgcgcagagcctggatgagctgatgggcgaacgcaccgacaacttcctgttccactat
aacttccctccgtactccgtgggcgaaaccggaatggtaggctcgccgaagcgtcgtgaa
attggtcacggtcgcctggcgaaacgcggcgtgctggctgtgatgccgaagctcgacgaa
ttcccgtataccgtgcgcgtggtttctgaaatcaccgaatccaacggttcttcctctatg
gcttccgtttgcggcgcgtcactggcgctgatggacgcgggcgtgccgattaaagcggcc
gtcgcgggcatcgcgatgggcctggtaaaagaaggcgaccgctatgtggtgctgtcagat
atcctcggcgatgaagatcatctcggcgatatggactttaaagtcgccggcagccgtgaa
ggtattaccgcgctgcagatggatatcaaaattgaaggcatcacccgtgagattatgcag
gtggcgctgaatcaggccaaaggcgcgcgtctgcatatcctcagcgtgatggagcaggcg
atcagcacgccgcgtggcgatatctctgaattcgcaccgcgtatccacactatcaaaatc
aatccggacaaaattaaggatgtgattggtaaaggtggctccgtgatccgcgcgctgacc
gaagaaaccggcaccaccattgaaatcgaagatgatggtacggtgaaaatcgccgcgacc
gacggcgataaagcgaagcacgctatccgtcgtatcgaagagattaccgcggaaatcgaa
gtgggccgtatctacaacggtaaagttacccgcatcgttgacttcggcgccttcgtcgct
atcggcggcggtaaagaaggcctggtgcatatttctcaaatcgctgacaaacgcgttgag
aaagttaccgactacctgcagatgggtcaggaagtaccggttaaggtgctggaagttgac
cgtcagggccgcgtgcgtctgagcattaaagaagcctcagagcagcagccgcaggcggaa
acggcagccgcgacccctgaagcagagtaa
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