Methanothermobacter sp. THM-1: FZP57_00280
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Entry
FZP57_00280 CDS
T06420
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mthm
Methanothermobacter sp. THM-1
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthm03016
]
FZP57_00280 (truD)
Enzymes [BR:
mthm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FZP57_00280 (truD)
Transfer RNA biogenesis [BR:
mthm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZP57_00280 (truD)
Prokaryotic type
FZP57_00280 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QHN05681
UniProt:
A0A6B9TDU3
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All DBs
Position
58303..59550
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AA seq
415 aa
AA seq
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MLNAETYLTSVKGTGGRIRVHNRDFYVEEIPLQEPTGSGPNTWIWIEKEGRTTLDVLLDI
ARELHLDRRRMGFAGMKDKRAVTRQWICVSNTEPEDVRRIEDRIRNVRFIRVTRNEKKLR
MGQLLGNRFRILIRDPETDDPLESTIRVLEELSEKGVPNYYGWQRFGSPRTTTHLVGRAL
VNDDVKGAVDAYIGNPIEGEPEGVFRARKLYDEGDIEAALEAMPPSMRYERMMLQPILRD
LRRDGITEESYIKAIQVLPKPLKRMFVHAYQSYLFNRAVSERLPLGINRYVPGDIVIDNE
QHIIHDADPGELEEMILNFEAHPTAPLYGSKVPLASGRPGEIERRILEEEGVSAGDFECR
RMRGLGSHGMRRAIRFRLWDASASEGPDGITVEFSIPKGCYATSVLREIMKVDAA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatgcagagacttacctcacatcagtgaaaggaacaggtggaagaatacgggtc
cataacagggacttctatgtcgaggagatacccctacaggagccaactggaagcggacca
aacacatggatatggatagagaaggagggcaggacaaccctcgatgtgctactggacatt
gcaagggagcttcaccttgacaggaggaggatgggatttgcagggatgaaggataagagg
gcggttacaaggcagtggatatgtgtcagcaacacagaacccgaagatgtaaggaggata
gaggacaggataagaaacgtgaggttcatcagggttaccaggaacgaaaagaaactccgg
atgggccagcttctaggtaacaggttcaggatactgataagggaccctgaaaccgatgac
ccccttgagtcaaccatcagggtccttgaggaactctctgagaagggagttccaaactat
tatggatggcagaggttcggaagcccaaggacaacgacgcaccttgttggaagggccctt
gtcaatgatgacgtgaagggggctgtcgatgcatatataggcaaccccattgagggggaa
cctgaaggtgtcttcagggcaaggaagctctatgatgagggtgatattgaggccgccctt
gaagcgatgcccccatcaatgaggtatgagcggatgatgctgcagccaatcttaagggac
ctcaggagggatggtattacagaggaatcatatataaaggccatacaggtcctccccaag
ccccttaagaggatgttcgtacatgcataccagtcctacctctttaacagggccgtgagt
gaaaggcttcccctcgggataaaccggtacgtgccaggggatatcgttattgataatgaa
cagcacataatacatgatgcggatcccggggaactcgaggagatgatcctcaacttcgag
gcccatccaacagcccccctctatggcagcaaggtaccccttgcatccggcagacccggt
gaaattgaacgccggatacttgaggaggaaggtgtttcagccggggactttgaatgcagg
aggatgaggggccttggaagccatggaatgaggagggccatacgcttcagactttgggat
gcctctgcatcagagggccctgatgggatcactgtggaattttcaatacctaaggggtgc
tatgcaacctctgtactcagggagataatgaaggtggacgctgcatag
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