Methanothermobacter sp. THM-1: FZP57_04080
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Entry
FZP57_04080 CDS
T06420
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mthm
Methanothermobacter sp. THM-1
Pathway
mthm03420
Nucleotide excision repair
mthm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZP57_04080
03430 Mismatch repair
FZP57_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthm03400
]
FZP57_04080
Enzymes [BR:
mthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZP57_04080
DNA repair and recombination proteins [BR:
mthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZP57_04080
MMR (mismatch excision repair)
Other MMR factors
FZP57_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
Cas_Cas4
TPR_6
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHN06327
UniProt:
A0A6B9TDE4
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All DBs
Position
complement(767965..770718)
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AA seq
917 aa
AA seq
DB search
MTGSLCRKGEACTEKQKMAVKKTEGPLVVVAGPGAGKTRVLVERVAYLVKRRGVSPENIL
VITFTEKAAGELKARLINCVGLDAELMQISTIHSFCSKVLRDHPEEHELGAGFEILDDES
QLIFLRTVFYKIGLNRYMKMGEVHRAIEFFNRCTENCIEPEELIDALRRKYPDREKYQGI
AGCYARYLELLREQKKIDFPGLEKEVYLLLNSSERVLESVRKRYRYIMIDEYQDTSPIQE
LIFRKIAGKNSSICVVGDEDQSIYGFRGATPENFIRFREEYDAEVVTLEDNFRSRAGIVL
TADSFMRGERHYEKTIKPVRDGGTDVVILKSRDVNSEARNIVSLIKKLKATGKIPEYGYV
ALLFRSVRNHADKVLAELRREGIPYIVRGDGSFLKRYEVRSMLYFLAYVDPPDYGGKFRK
WDGWWNISRFRGEFLDLTAETLRALESLDRNCRLSDFTSRGELEEIGVHGEDAEKILGLN
RIRHEVGEGSLTVLKTFYRILEVTGYLRRLIEDGSDSSRAKIFNLAKLSSLIDRYEAIKP
GARIQDLLWYLYLLPSHLHHDEAALEDPASVKIMTVHQAKGLEFPVVFICSVINGRFPVK
RRKGRDIIPIPRELLLSPGEVPDEDRRLFYVAMTRAQDALIISTAPRINTRKVGISPFIT
DLREKCGIYECDCTSVSRCLTREWSEEPLRINFSALFTYEECPFRYMLIYHYGFVYPETF
MQRYGIILHRCLEELHLAMKNSEEINGALIRRIVERCWIPMGRDDDVKKRRLERDLLNYY
HDSRDHTDEVISVEEPFSIPDDDIIIEGRTDLIIRTRDGGLELVDFKAREHGGVERMALE
YQLRTYEYALRERYRFDSLSAYAIKDSMRISFDSDPEFRVKERIAETVARIRDECFEPRK
NPFCSRCVFRTFCGVGD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
ataacgggttcactctgcaggaagggcgaggcatgtacagagaagcagaagatggctgtt
aagaagacggaggggccgctggtggttgtggcgggacccggggccgggaagacccgtgta
ctcgttgaaagggtcgcctacctcgtcaagagaaggggtgtcagccccgagaacatactc
gtcataaccttcacagagaaggcagccggtgaactgaaggcgaggctcataaactgtgtg
ggactggacgccgagctcatgcagatatccaccatacactcattctgcagcaaggtgctg
agggaccacccggaggaacacgaacttggggcgggatttgagatcctcgacgatgaatcc
cagctcattttcctcagaacggtgttctataaaataggattgaaccgctacatgaagatg
ggggaggtgcacagggccatcgaattcttcaacagatgcaccgaaaactgtattgaacct
gaagagctcatagacgccctccggaggaaatatcctgacagggaaaaataccagggcatc
gccgggtgctatgcccgctaccttgaactcctcagggagcagaagaagatagacttccct
ggccttgaaaaggaggtctacctcctccttaactccagcgagagggtactcgaatccgta
aggaagaggtacaggtacataatgatagacgagtaccaggatacaagccccatacaggag
ctgatattcaggaagatagcagggaaaaactccagcatctgcgtggtgggggatgaggac
cagagcatctatggcttcaggggagccacaccagagaacttcataaggttccgtgaagag
tacgacgcagaggtggtcaccctggaggacaacttccggtcccgggcagggatagtcctg
actgcagacagcttcatgaggggcgagagacactacgagaagaccatcaaaccggtaagg
gacggcgggaccgacgttgttatactgaagagcagggacgttaactcagaggccaggaac
atagtatcactaataaagaaactgaaagccaccggcaagatacctgaatacggatacgtc
gcactcctcttcaggagcgtccgcaaccacgcagataaggtccttgcagagctcaggagg
gagggcataccctacatagtgcgtggggacggctccttcctcaaaaggtatgaggtgagg
agcatgctctacttcctcgcctacgtggacccaccggactatggaggaaaattcaggaag
tgggatggctggtggaacatatccaggttcaggggcgaattcctggacctcaccgctgaa
accctccgggccctcgagtcccttgacaggaactgcagactctcggacttcacatcaagg
ggggaactcgaggaaatcggtgtacacggggaggatgcagagaagatccttggcctcaac
aggatacgccatgaggttggggagggatcactgacagttctcaagacattctacaggata
cttgaggttacagggtacctcaggaggctcatagaggatgggagtgacagtagcagagct
aaaatattcaacctcgcaaagttaagctcactgatagatagatacgaggccataaagccc
ggggcaaggatacaggaccttttatggtacctctacctcctacccagccacctccaccac
gacgaggcagccctggaggacccggcgtcggtgaagatcatgacggttcaccaggcaaag
ggcctcgagtttcctgttgtcttcatctgttcggtcataaacggcaggttccctgttaaa
aggcgtaaggggagggacatcatacccatacccagggaactcctgctatcacccggggag
gtacctgatgaggaccggcgcctcttctacgttgcaatgaccagggcccaggacgcccta
atcatatcaacggccccccgtatcaacaccagaaaggttggaatatcgcccttcatcaca
gacctcagggagaagtgcggcatctacgagtgtgactgcacatccgtcagcagatgcctc
acaagggagtggagtgaggagcccctcaggatcaacttctcggccctcttcacctacgag
gagtgccccttcaggtacatgctcatataccactacggcttcgtctaccccgagaccttc
atgcagcgctatgggatcatactgcacaggtgccttgaggagctccacctggccatgaag
aactcggaggagataaacggggccctcataaggagaatcgttgaaaggtgctggataccc
atggggagagacgatgatgtcaaaaagaggcgccttgagagggacctcctcaactactac
cacgacagccgggaccacacagatgaggtcatatcggtggaggagcccttctccataccc
gatgatgacataataatcgagggaagaacagacctgataatcaggacccgggatggtgga
ctggaactcgttgacttcaaggcccgtgagcacggcggtgttgagaggatggcccttgag
taccagctccggacctatgaatacgcactaagggagaggtacaggttcgacagtctctcc
gcctatgctataaaggactccatgaggatatcctttgactccgaccctgaattcagggtt
aaggagaggatcgctgaaaccgtcgcaaggataagggatgaatgcttcgagccacggaag
aaccccttctgcagcaggtgcgtgttcaggaccttctgtggtgtgggggactga
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