Methanothermobacter sp. THM-1: FZP57_04345
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Entry
FZP57_04345 CDS
T06420
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mthm
Methanothermobacter sp. THM-1
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthm03400
]
FZP57_04345
DNA repair and recombination proteins [BR:
mthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FZP57_04345
Archaeal homologous recombinant proteins
FZP57_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
BLOC1_2
AAA_15
MscS_porin
ABC_tran_CTD
AAA_13
Baculo_PEP_C
AAA_29
DUF948
NPV_P10
SMC_N
COG6_N
DUF7310
Fib_alpha
DUF4407
HAUS-augmin3
DUF1664
Bacillus_HBL
IFT57
AAA_21
APG6_N
GAS
KASH_CCD
HAP1_N
Phage_GP20
EzrA
DUF4200
Crescentin
ATG17_like
OmpH
DUF7801
ZapB
CoV_S2
Bap31_Bap29_C
Laminin_II
DUF16
UPF0242
FPP
Herpes_U30
COG4_N
YLR146W-A
TMF_TATA_bd
Lebercilin
DASH_Dad2
Seryl_tRNA_N
TMPIT
DUF3450
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
QHN06370
UniProt:
A0A6B9TEP3
LinkDB
All DBs
Position
complement(836241..838760)
Genome browser
AA seq
839 aa
AA seq
DB search
MIIESLELRNIRSYTSESVDFREGVTLFEGDIGSGKSTILLAIEFALFGLGDQKGASLLR
TDANSGSVKLRFRVDDKVYTAYRELKRTSNTIQQQNIYLETSRGRRKLSANEMKEAVLEI
LRYNEPSNPRAKSHIYRYAVFTPQEEMKTIIEMNPKHRLERLRKAFGIEEYSVAVENARL
IQRRIERLSERLRDRSSGLEDDREKLKRLREEKDSLLKEKAGIESRREALESELEGLEGE
FEALNDKKKRIEDAMARLAFLETEIKAINRTVDSLRKRNKNLEKEYNRTLEEIENCGKKR
DKLSEELKRFKDEIDALQNDMETLTDDYERFKRAGLELRHLEATLNEKTGDCRRLNSEIR
ELELKIGELNSEIRELESLMERPSVTEEEVNEKIRELNAELRERENERARLEGKLEDYAN
IRSSSICPTCDRKVDPAEVEEKIASAGERIKEINGEIEELEAEKGDQEELLDDIRRFRVI
EDRLRDRMRTLKEEEEKLRKKKDDLKELKVRIKDIENQINENRKTVEELGDTASRMNELK
EKLDAAREREKEISGRISGIDGKISEMQGRIRELNPETSREYRKNLEEIELKKREIEEKK
REIKGLQEIISSHDEVESAIERLESEIKEKKKSHNSVISRLGEIKGSIREKENRIDDLRS
VVETKGGYLKRADELDDYVKWLAEYFIPALDDIERHVLAWINQEFDSHFRKWFGMLVDDP
DKSVRIDEDFTPMVEQDGYEQDLRYLSGGERTSVALAYRLALNKVVQGLSTTLKSDILIL
DEPTDGFSKEQLYKLKDIFDELDSPQIIIVSHEEELENLADHIYLVNKESGVSRIEEVL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
ctgataatcgagtcacttgaactccgcaacataaggagttacacatcagagtcagtggac
ttcagggagggtgtgacgctctttgagggggacataggatcagggaaatccaccatactc
cttgcaatagaattcgcattattcggcctcggggaccagaagggcgcaagcctactgagg
actgatgcaaattcagggtcggtcaaactcagattcagggtggatgataaggtctacaca
gcctacagggaacttaaaaggacctcaaacaccatacagcagcagaacatctaccttgag
acctccagagggaggaggaaattatctgcgaatgagatgaaggaggccgttcttgagatc
ctgaggtataatgaaccatcaaacccccgtgcaaagagccacatctaccgctacgcggtc
ttcacaccccaggaggaaatgaagaccataatagagatgaaccccaaacaccggcttgaa
aggctccggaaggccttcggtattgaagagtacagtgtggcagtggaaaacgccaggtta
atccaaaggaggatagaaagactctctgagagactcagggacaggtcgtcaggccttgaa
gatgacagggaaaaactgaagaggctcagggaagaaaaggacagcctccttaaggagaag
gcgggaattgaatccagaagagaggcccttgaatctgaacttgagggtcttgaaggggaa
tttgaagctcttaacgataagaaaaagcggattgaggatgcaatggccagactggctttc
cttgaaacggagataaaggctataaacaggacagtggactccctgaggaaaaggaataaa
aacctggagaaggagtacaacaggaccctcgaggagattgagaactgcggaaagaaaagg
gataagctatcagaggaacttaaaaggttcaaagatgagatagatgccctccagaatgat
atggagactctcactgatgattatgaaaggtttaagagggcgggccttgaactcaggcac
cttgaggccacgctgaatgagaagacaggggactgcaggaggcttaattctgagatcagg
gaacttgaactaaaaataggagaacttaattctgagatcagggaacttgaatcattaatg
gagaggccatcagtcacagaggaagaggtcaatgagaaaatcagggaactcaacgctgaa
ctgcgtgaaagggagaatgaaagggcaagacttgagggaaaacttgaggactacgctaac
ataaggagcagcagcatatgccccacctgtgacaggaaggttgacccggcggaagtggaa
gagaagatagcctcagcaggtgagaggatcaaagaaattaatggggagattgaggaactt
gaggctgaaaaaggggatcaggaagaactactcgatgatataagaaggttcagggttatt
gaggaccgactcagggaccggatgagaactctgaaggaagaagaggagaaactcagaaaa
aagaaggacgatcttaaggaactcaaagtcagaataaaggatatagaaaatcagataaat
gagaacaggaaaactgtggaggaactcggggatacagcatccaggatgaatgaacttaaa
gagaaacttgatgctgcacgggaaagggagaaggagatttcaggcaggatctcaggtatt
gatgggaagatctcagagatgcaggggaggatcagggaactgaaccctgaaaccagcagg
gagtacaggaaaaaccttgaagagattgaactgaagaaaagggagattgaagagaagaaa
cgtgaaatcaaagggcttcaggagatcatatcatcccatgatgaagttgaatccgccata
gagcggcttgaatctgagataaaggaaaaaaagaagtcacataatagtgtaatttcccgc
ctcggggagatcaaaggttcaatcagggaaaaggaaaaccgtatagatgacctcagatcg
gtggtggagaccaaggggggctacctgaagagggctgatgaactggatgattacgtgaag
tggcttgccgagtacttcataccagcccttgatgatattgaaaggcatgtccttgcatgg
atcaaccaggaatttgacagccacttcaggaagtggttcgggatgctggttgatgaccct
gacaagtcggtgaggatcgatgaggacttcaccccgatggttgaacaggacggctatgaa
caggacctcaggtacctcagtggtggtgagaggacaagcgtcgccctcgcctaccgcctt
gcactgaacaaggtcgttcagggcctttcaacaacactgaagtccgatatactgatactt
gacgagccaacagatggattcagcaaggaacagctctacaagctcaaggacatctttgat
gagcttgattcaccccagataatcatagtatcccatgaggaggagcttgaaaaccttgct
gaccatatatacctggtgaacaaggaatcaggtgtttcaaggatagaggaggtcctctag
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