Methanothermobacter sp. THM-1: FZP57_04510
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Entry
FZP57_04510 CDS
T06420
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mthm
Methanothermobacter sp. THM-1
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthm03016
]
FZP57_04510 (thpR)
Enzymes [BR:
mthm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FZP57_04510 (thpR)
Transfer RNA biogenesis [BR:
mthm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FZP57_04510 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF4315
Motif
Other DBs
NCBI-ProteinID:
QHN06397
UniProt:
A0A6B9TDK8
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All DBs
Position
877431..877985
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AA seq
184 aa
AA seq
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MKVRAFLAVDVDEKLKDRIIEVQEKLKGADAQIKFVEPENLHFTLKFFGDTGENRLKRIG
RIVDETISEYEPFRIHIKGAGVFPNPRYIRVVWLGVEDPETFSKLQEHLDTGFRGIGFRP
ERDYVPHLTIGRVKGPRNREKLADIISDLEEVDIGSMEVREIALKKSELTPAGPLYSDIR
VFRL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtaagggctttccttgcagtcgatgttgatgagaaactgaaggacaggataatt
gaggtccaggagaaactgaagggtgccgatgcccagatcaaattcgttgaacccgaaaac
ctccacttcaccctgaaattcttcggggacaccggtgagaacagacttaaaaggataggg
agaatcgtggatgaaaccataagtgaatatgagccattcagaatccatataaagggtgcc
ggggttttcccgaaccccaggtacatacgtgtggtctggctcggtgttgaagaccctgaa
acattctccaaacttcaggaacaccttgacactggtttcagggggattggcttcagaccc
gaaagggactacgtaccccacctcaccattggaagggttaagggtcccaggaacagggaa
aagcttgcggatataatctcagaccttgaggaagtggatatcgggtccatggaggtcagg
gagatagcactcaagaagagtgaactcacacctgcaggacccctctactcggatatccgg
gtcttcaggctttaa
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