Methanothermobacter sp. THM-1: FZP57_05990
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Entry
FZP57_05990 CDS
T06420
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mthm
Methanothermobacter sp. THM-1
Pathway
mthm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FZP57_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthm03021
]
FZP57_05990
Transcription machinery [BR:
mthm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FZP57_05990
Prokaryotic type
Archaeal type
TFB
FZP57_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
BRF2-like_C_cyclin_rpt
Zn_ribbon_LysW
HTH_AsnC-type
HTH_Tnp_ISL3
UPF0181
Cas12f1-like_TNB
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
QHN06628
LinkDB
All DBs
Position
complement(1159778..1160710)
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AA seq
310 aa
AA seq
DB search
MRSDVSEIEKETKCPECGSEDLRGDYERAEIVCGKCGLVIDDNLVDMGPEWRAFDHEQRD
KRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLRKWQRKIRISGATER
NLAFALSELDRDSSRLGLPRSVREAASMVYRRAVENKLIRGRSIEGVVAASLYAACRSCN
VPRTLDEIAEVSRVSKKEVGRTYRFLTRELNIKLPPTSPVDYVPRFASELGLSGEVQSKA
IEIIEMAMKNGLTSGRGPTGVAAAALYIASVLLGERKTQRDVAEVAGVTEVTIRNRYKEL
TEQLDLGVTL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgatgtttctgaaatagagaaggaaacaaaatgccctgaatgtggctccgaa
gatctcaggggcgactacgaaagggctgaaattgtctgtgggaaatgcgggcttgtcata
gatgataacctggttgatatgggtcctgagtggagggcctttgaccatgaacagagggac
aagaggacaagggtaggtgcacccataacctacaccatacacgacaagggactctccaca
atgatagactggagaaacaaggacatatacggaagggacataccggcaaggaacagggcc
cagtggtaccgtctcaggaagtggcagaggaagataaggatttcaggcgccacagagaga
aatcttgcatttgctctcagtgaacttgacagggactcatcaaggcttggcctccccaga
agtgtgagggaagccgcctcaatggtgtacaggagagcggtggaaaacaaactcataagg
ggaaggagcattgaaggagttgttgcagcatcactctacgcggcatgcagaagctgcaac
gtccccaggacacttgatgagatcgctgaggtatcaagggtaagcaagaaggaggttgga
aggacctacaggttcctcacaagggaactgaacataaaacttcccccaacatcacccgtt
gactacgttccaaggtttgcaagtgaactgggactttcaggggaggtccagtccaaggcc
atcgaaataattgaaatggccatgaagaacggtttaacatctggaaggggccctacaggt
gttgcagcggcagcactgtacatagcatctgttcttctgggtgagaggaagacccagagg
gacgttgccgaggttgcgggtgtaaccgaggtaacaataaggaacagatacaaggagctc
acagagcagctggatcttggtgtaacactctag
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