Methanothermobacter sp. THM-1: FZP57_08640
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Entry
FZP57_08640 CDS
T06420
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mthm
Methanothermobacter sp. THM-1
Pathway
mthm03030
DNA replication
mthm03420
Nucleotide excision repair
mthm03430
Mismatch repair
mthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZP57_08640
03420 Nucleotide excision repair
FZP57_08640
03430 Mismatch repair
FZP57_08640
03440 Homologous recombination
FZP57_08640
03460 Fanconi anemia pathway
FZP57_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthm03000
]
FZP57_08640
03032 DNA replication proteins [BR:
mthm03032
]
FZP57_08640
03400 DNA repair and recombination proteins [BR:
mthm03400
]
FZP57_08640
Transcription factors [BR:
mthm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FZP57_08640
DNA replication proteins [BR:
mthm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FZP57_08640
DNA repair and recombination proteins [BR:
mthm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FZP57_08640
MMR (mismatch excision repair)
FZP57_08640
DSBR (double strand breaks repair)
HR (homologous recombination)
FZP57_08640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
SHLD2_OB1
Zn_Ribbon_TF
DZR_2
DZR
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
QHN07070
LinkDB
All DBs
Position
complement(1644588..1646966)
Genome browser
AA seq
792 aa
AA seq
DB search
MKEEIKREYQKIKDRMSLEEFQERIEKRKQELDDVGFMDELSIATMITDEILRDENELIS
EKPEHRLDKISKLEEGASTPLTGRVMRISSPRTFTTRKGKDGKLTNVILADDTGEIRTVF
WTENIKFLKKFSEGDVIRIRDVNVKGGFGGRKEAHLMPRSTVEVLDPSDFPEFPEYTEEI
TPLGELVEDEEVNVIARIRGISRVRTFERDGRDGKFVTLELLDSTGSTTYTLWNNDVNLI
EELGLEEGDAVKILGAQTRRRDDSVTLTHTSTTRIIRGDYDVPEVREEIMKIGDLHEKDG
VTVIGLVTRVYEPIEFERNDGTTGSLRSVEVTDDTGSARVTLWNDDAFLKINKGDIVKIS
GARVEFDEYSNSYRINTNFNTRITINPKSDESLLRLLEEYREHLRPLKISQVLEIEDEGE
EVDVVGRIFSLTDPREFEREDGTGIVRSMELADETGKIRVSLWNEKAQKPLNIGDAIRIE
NARIRFGLYSVELSAGRTTRITEPLPEDIQDLPSFEELEEMLYTTKKIDELEEDNTDIRI
VARVIDLFDPKEFQRGDGTPGMVRTVEFADDTGSIRASLWDEKAEMPLSIGDPVKIENPR
VIYRDDMGGGRLELSIGRSSRIEAATERDMKLLPSFEELQEILYPLKNIEDLDDESRNVM
IRGELNEMYGGRILSVKCPSCNERLDMNEENICNFCGELVDEPRYLLMIPGWISDDTGEI
RTIFFGREAEKVLGMTTREVVDTINRSADESALQERVEDLNGATVTVIGNAEFDEYNEEL
RFIPRKVVNIEL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaaataaaaagggaataccagaagattaaggacagaatgtcccttgaagaa
tttcaggaacgcatagagaagaggaaacaggaacttgatgatgttgggttcatggatgaa
ctctcaatcgccacaatgataacagatgagatcctcagggatgaaaatgaactcatctca
gagaaacccgaacacaggctggataaaatatccaaactcgaggagggtgccagcacacca
ttgaccgggagggtcatgaggatatcaagtccaaggaccttcaccacaaggaagggaaag
gatggtaaactcacaaacgtaatccttgcagatgacacaggggaaatcaggacggttttc
tggacagagaacatcaagttcctgaagaaattcagtgagggcgacgtgataaggataagg
gatgtgaacgtaaagggcggcttcggaggcaggaaggaggcccatctgatgccaagatcc
acggttgaagtcctggacccctcagatttccctgaattccctgaatacaccgaggagatc
acacctttaggggaacttgttgaggacgaggaggttaatgtcattgcaaggatcagggga
atatcccgtgtaaggacctttgagagggatggaagggatggtaaatttgttacacttgaa
ctgcttgactccacaggttcaacaacctacaccctctggaacaatgatgttaacctcata
gaggaactgggacttgaagagggagacgccgtaaagatactgggggcccagacaaggaga
cgtgatgacagcgtgacactcacccacacaagcaccacaaggataatcaggggcgactac
gatgtccctgaagtcagggaggagataatgaagataggggacctccatgagaaggacggc
gtcaccgtgattggactggtaacaagggtctatgagccgatagaatttgagaggaacgat
ggcacaacaggctccctgaggtcagttgaggtcacagacgacacaggatctgcaagggta
accctctggaatgatgacgccttcctgaagataaacaagggggacatcgttaaaatatca
ggggcaagggtggagtttgatgaatacagcaactcctaccgcataaacaccaacttcaat
acaaggataaccatcaaccccaaatccgacgagtcactcctgaggctccttgaggagtac
agggagcacctgaggccattgaagatatcacaggtacttgaaattgaggatgaaggagag
gaggttgatgttgtaggccgcatattcagcctcacagatccaagggaatttgagagggaa
gacggcacaggaatcgtaaggtcaatggaacttgccgatgaaacaggcaaaataagggtc
agcctctggaacgagaaggctcaaaagcccctgaacatcggggacgccataagaattgag
aacgcaagaatcaggtttggtctatacagcgttgaactcagcgctggaagaacaacaagg
attactgagccactcccggaggacattcaggatttaccatcctttgaggagcttgaagaa
atgctctacacaacaaagaagatagatgaacttgaagaggacaacaccgacataaggata
gttgcaagggtcattgacctcttcgatccaaaggaattccagaggggtgatggaactcca
ggaatggtgaggacggttgaatttgcagatgacaccggctcaataagggcaagcctatgg
gatgagaaggctgagatgcccctcagcataggagaccctgtcaagatagagaatccgagg
gtaatctacagggatgatatgggtggaggcagacttgaactcagcataggaagaagttca
agaatcgaggcagccactgaaagggatatgaagctcctgccatcctttgaggagctccag
gagatactctaccctctgaaaaacattgaggaccttgatgatgagtcaaggaacgtcatg
atcaggggggagctcaatgaaatgtacgggggacgcatactctctgtgaaatgcccttcg
tgtaatgagaggcttgatatgaatgaggagaacatatgtaacttctgcggagaacttgtt
gatgaaccaaggtacctcctgatgatccccggatggatcagcgatgataccggagagata
aggacgatcttctttggaagggaggctgaaaaggtcctggggatgactacaagggaggtt
gttgatactataaacaggtccgcagatgaatcagcacttcaggagcgtgtcgaggatctt
aacggcgccaccgtaacggttatagggaacgcggagttcgatgaatacaatgaggagctt
agattcatcccgaggaaggttgtgaatattgaactctga
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