Mycolicibacterium thermoresistibile: 4412656_00876
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Entry
4412656_00876 CDS
T05542
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4412656_00876 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthn03021
]
4412656_00876 (rpoB)
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_00876 (rpoB)
Enzymes [BR:
mthn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4412656_00876 (rpoB)
Transcription machinery [BR:
mthn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4412656_00876 (rpoB)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4412656_00876 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
SNW17073
LinkDB
All DBs
Position
1:953937..957425
Genome browser
AA seq
1162 aa
AA seq
DB search
MAVSSQSKSAINTNNSIPGAPNRISFAKLREPLEVPGLLDVQTESFEWLIGSDTWREKAI
ARGETDPISGLEEVLSEISPIEDFSGNLSLSFADPRFDEVKASVEECKDKDMTYAAPLFV
TAEFMNAESGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDKSKDKAT
ENDITSVKVIPSRGAWLEFDVDKRETVGVRIDRKRRQPVTVLLKALGWTNEQIVERFGFS
EIMMSTLEKDNTANTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYK
VNKKLGLPAGETITTTTLTEEDIVATIEYLVRLHQGDTTMTVPGGFEVPVEEDDIDHFGN
RRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQ
LSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLSVYARVNPFGFIETPYRKVVDGVVTDEVVYLTADEEDRYIVAQANSPTDDEGRFT
EDRVLVRKKGGEIEYVSGSQVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQA
VPLVRSEAPLVGTGMELRAAIDAGDVVVAEKAGVIEEVSADYITVMHDDGTRETYMLRKF
ARSNHGTCANQKPIVDAGQRVEAGQVIADGPCTQNGEMALGKNLLVAIMPWEGHNYEDAI
ILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDERGIVRIGAE
VRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSR
EDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPDGTPVDI
ILNTHGVPRRMNIGQILETHLGWVAKSGWDINLVGDKDLASKLPEELHSAPPNSIVATPV
FDGAQEEELQALLASTLPNRDGQQMVDNDGKAILYDGRSGEPFPYPVTVGYMYILKLHHL
VDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDT
VGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLE
RAAANLGINLSRNESASVEDLA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggccgtctctagccagagcaagtcagccattaacaccaataactccattcccggcgca
cccaaccggatttcttttgccaagctccgcgaaccgctggaggttccgggcctgcttgat
gtgcagactgaatcgttcgagtggttgatcggctcggacacctggcgggaaaaggccatc
gcccgcggagagaccgacccgatcagtggcctcgaggaagtactctccgaaatctccccg
atcgaggacttctccggcaacctgtcgctgtccttcgccgatccgcgcttcgacgaggtc
aaggcctccgtcgaggagtgcaaggacaaggacatgacctacgcggcgccgttgttcgtg
accgcggagttcatgaacgccgagagcggcgagatcaagagccagacggtcttcatgggc
gacttcccgatgatgaccgagaagggcaccttcatcatcaacggcaccgagcgtgtcgtg
gtgagccagctggtgcggtccccgggcgtgtatttcgacaagtccaaggacaaggccact
gagaacgacatcaccagcgtcaaggtgatccccagccggggcgcctggctggagttcgac
gtcgacaagcgcgagaccgtcggggtgcgcatcgaccgcaagcgccgccagccggtcacc
gtgctgctcaaggcgctgggctggaccaacgagcagatcgtcgagcggttcggcttctcc
gagatcatgatgtcgaccctggagaaggacaacaccgccaacaccgacgaggcgctgctg
gacatctaccgcaagctgcgcccgggcgaaccgccgaccaaggagtccgcgcagaccctg
ctggagaacctgttcttcaaggagaagcgctacgacctggcccgcgtcggccgctacaag
gtcaacaagaagctcggcctgccggccggtgagacgatcaccacgaccacgctcaccgaa
gaggacatcgtcgccaccatcgagtacctggtgcggctgcaccagggcgacacgacgatg
accgtgccgggcggcttcgaggtccccgtcgaagaggacgacatcgaccacttcggcaac
cgccgcctgcgcaccgtcggcgagctgatccagaaccagatccgggtcggcctgtcccgc
atggagcgcgtcgtgcgcgagcggatgaccacccaggacgtcgaggcgatcacgccgcag
accctgatcaacatccgccccgtcgtggcggcgatcaaggagttcttcggcaccagccag
ctgagccagttcatggaccagaacaacccgctgtcgggtctgacccacaagcgccggctg
tcggcgctgggcccgggcggtctgagccgggagcgcgccggcctcgaggtccgcgacgtc
cacccgtcgcactacggccggatgtgcccgatcgagacccccgagggtccgaacatcggt
ctgatcggctcgctgtcggtgtacgcccgggtcaatccgttcgggttcatcgagacgccg
taccgcaaggtcgtcgacggtgtggtcaccgacgaggtggtctacctgaccgccgacgag
gaggaccgctacatcgtcgcgcaggccaactcgcccaccgacgacgagggccggttcacc
gaggaccgcgtgctggtccgcaagaagggcggcgagatcgagtacgtgtcgggctcgcag
gtcgactacatggacgtctcgccgcgccagatggtgtcggtggccacggccatgattccg
ttcctcgagcacgacgacgccaaccgggccctgatgggtgccaacatgcagcgtcaggcg
gttccgctggtgcgcagtgaggcgccgctggtcggcaccggcatggagctgcgggccgcg
atcgacgccggcgacgtcgtggtcgcggagaaggccggcgtgatcgaggaggtctccgcc
gactacatcaccgtcatgcacgacgacggcacccgcgagacctacatgctgcgcaagttc
gcccggtccaaccacggcacctgcgcgaaccagaagccgatcgtggacgccgggcagcgg
gtggaggccgggcaggtcatcgccgacgggccgtgcacccagaacggtgagatggcgttg
ggcaagaacctgctcgtcgcgatcatgccgtgggagggccacaactacgaggacgcgatc
atcctctccaaccggctggtggaggaggacgtgctcacctcgatccacatcgaggagcac
gagatcgacgcccgcgacaccaagctgggcgccgaggagatcacccgggacatccccaac
atctccgatgaggtgctggccgacctcgacgagcgcggcatcgtccgcatcggcgccgag
gtccgcgacggcgacatcctggtcggcaaggtcaccccgaagggggagaccgagctgacc
ccggaggaacggctgctgcgcgcgatcttcggcgagaaggcccgcgaggtccgcgacacc
tcgctgaaggtgccgcacggcgagtccggcaaggtcatcggcatccgggtgttctcccgc
gaggacgacgacgagctgccggccggtgtcaacgaactggtccgcgtctacgtggcccag
aagcgcaagatctccgacggcgacaagctggccgggcgccacggcaacaagggcgtcatc
ggcaagatcctgccggtcgaggacatgccgttcctgccggacggcaccccggtcgacatc
atcctcaacacccacggtgtgccgcggcggatgaacatcggccagatcctggagacccac
ctcgggtgggtggccaagagcggctgggacatcaacctcgtcggcgacaaggacctggcg
tccaagctgcccgaggagctgcactcggccccgccgaacagcatcgtcgccaccccggtg
ttcgacggtgcgcaggaggaggaactgcaggcgctgctcgcctcgaccctgccgaaccgc
gacggtcagcagatggtcgacaacgacggcaaggcgatcctgtacgacgggcgctccggg
gaaccgttcccgtacccggtgacggtcggctacatgtacatcctcaagctgcaccacctg
gtggacgacaagatccacgcccgctccaccggcccgtactcgatgatcacccagcagccg
ctgggcggtaaggcgcagttcggtggccagcggttcggcgagatggagtgctgggccatg
caggcctacggcgccgcgtacacgctgcaggagctgctgaccatcaagtccgacgacacc
gtcggccgggtcaaggtgtacgaggcgatcgtcaagggcgagaacatccccgaacccggg
attccggagtccttcaaggtgctgctcaaggagctgcagtcgctgtgcctcaacgtcgag
gtgctgtccagcgacggcgccgcgatcgagatgcgcgacggcgacgacgaggatctggag
cgcgcggcggccaatctgggcatcaacctgtcgcgcaacgaatccgcctcggtggaggac
ctcgcatag
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