Mycolicibacterium thermoresistibile: 4412656_00877
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Entry
4412656_00877 CDS
T05542
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4412656_00877 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthn03021
]
4412656_00877 (rpoC)
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_00877 (rpoC)
Enzymes [BR:
mthn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4412656_00877 (rpoC)
Transcription machinery [BR:
mthn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4412656_00877 (rpoC)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4412656_00877 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
SNW17074
LinkDB
All DBs
Position
1:957483..961430
Genome browser
AA seq
1315 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITDVDEEMRHNELSTLEAEMAVERKAVEDQRDLDLAERAKKLEQD
LAELEAEGAKSDVRRKVRDAGEREMRQIRDRAQRELDRLDEIWNTFTKLAPKQLIVDEVL
YRELVDRYGEYFQGGMGAEAIKKLIENFDIDAEAEALREVIRSGKGQKKLRALKRLKVVA
AFQQSSNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSHNILSPASGRPLAMPRLDMVTGLYYLTTMVPGDKGEYQ
PATKDAPEQGVYSSPAEAIMAMDRGVLSVRAKIKVRLSDQRPPADVEAELFPDGWKPGDV
WTTETTLGRVMFNELLPQDYPFVNEQMHKKVQARIVNDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPQKKEILDRYEKEADGIEKKYQRGALNYEERNEALVKIWQDA
TEEVGQVLRDFYPEDNPIIMIVESGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGINVTL
AERQPDGTLVRDQHIETSAYARTLATDAVDKDGNVIVERGHDLGDPQIEALLAAGITEVK
VRSVLTCATGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVG
GDITGGLPRVQELFEARVPRNEAPIADVSGRIRLEEDDKFYKITIIPDDGGEEVVYDKLS
RRQRLKVIKHPDGTERLLADGDHVEVGQQLLEGSANPHEVLRVQGPREVQIHLVKEVQEV
YRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLTERAEFEAENRRVVAEGGEPA
AGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPAG
TGIPRYRNIQVQPTEEARAAAYTIPTYEDQYYSPDFGQATGAAVPLDDYGYGDYR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgagctccggatcggcctggccaccgccgacgacatc
cgtcggtggtcctacggcgaggtgaagaagccggagaccatcaactaccgcacgctgaag
ccggagaaggatggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggaatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgggagcggatgggccacatcgaactggccgcgccg
gtcacccacatctggtacttcaagggtgtcccgtcacggctcggctacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgccgcctacgtcatcaccgacgtcgac
gaggagatgcgccacaacgagctgtccacgctcgaagcggagatggccgtcgagcgcaag
gccgtcgaggaccagcgtgacctcgacctggccgagcgggccaagaagctggagcaggac
ctcgccgaactcgaggccgagggcgccaagtccgacgtccgccgcaaggtgcgcgacgcc
ggcgagcgcgagatgcgccagatccgcgaccgggcccagcgcgagctggaccggctcgac
gagatctggaacaccttcaccaagctggcgcccaagcagctgatcgtcgacgaggtgctc
taccgcgagctggtcgaccgctacggcgagtacttccagggcgggatgggcgccgaggcg
atcaagaagctgatcgagaacttcgacatcgacgctgaggccgaggcgctgcgcgaggtg
atccgcagcggcaaggggcagaagaagctgcgggcgctgaagcggctcaaggtggtcgcg
gcgttccagcagtcgagcaactcaccgatgggcatggtgctcgacgcggtgccggtgatc
ccgccggagctgcggccgatggtgcagctcgacggtggccggttcgccacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccggcgcggccgtccggtcaccgggccgggcaaccgtccgctcaag
tcgctgtcggatctgctcaagggcaagcagggccggttccgccagaacctgctcggtaag
cgcgtcgactactccggccgttcggtgatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtcgagcggcagcgt
ccgcaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccaccctgcaccgcctgggcatccaggcgttcgagccgctgctggtggagggcaag
gccatccagctgcacccgctggtgtgcgaggcgttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgagcgccgaggcgcaggccgaggcccgcatcctgatgctg
tccagccacaacatcctgtcgccggcgtccggccgcccgctggccatgccgcgactggac
atggtgaccgggctgtactacctgaccacgatggttccgggggacaagggcgagtaccag
cccgccaccaaggacgccccggagcagggtgtgtacagcagcccggccgaggcgatcatg
gcgatggaccgcggcgtgctgagcgtccgggccaagatcaaggtgcggctgtcggatcag
cggccgccggccgacgtcgaggccgagctgttcccggacggctggaagccgggtgacgtc
tggacgacggagaccaccctgggccgggtgatgttcaacgagctgctgccgcaggactat
ccgttcgtcaacgagcagatgcacaagaaggtccaggcccggatcgtcaacgacctggcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggcgacccgctccggtgtgacggtctcgatggccgacgtgctggtgccgccgcag
aagaaggagatcctggaccgctacgagaaggaagcggacgggatcgagaagaagtaccag
cgcggtgcgctcaactacgaggaacgcaacgaggccctggtcaagatctggcaggacgcc
accgaagaggtggggcaggtgctgcgggacttctaccccgaggacaacccgatcatcatg
atcgtggagtccggcgccacgggtaacttcacccagacccggaccctggccggcatgaag
ggcctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctcgttccgt
gagggcctgaccgtgctggagtacttcatcaacacccacggcgcccgtaagggtctggcg
gacaccgcgctgcggaccgccgactcgggttacctgactcgtcgtctggtggacgtgtcg
caggacgtcatcgtgcgcgagcacgactgcgagaccgagcgcggcatcaacgtcacgctc
gccgagcggcagccggacggcacgctggtccgcgatcagcacatcgagacctcggcctac
gcccggacgctggccaccgacgcggtcgacaaggacggcaacgtcatcgtcgaacggggc
cacgacctgggcgacccgcagatcgaggcgctgctggcggccggcatcaccgaggtcaag
gtgcggtcggtgctcacctgcgccaccggcaccggggtgtgcgcgatgtgctacggccgt
tcgatggcgaccggcaagctggtcgacatcggcgaggcggtcggcatcgtcgccgcccag
tccatcggtgagcccggtacccagctgaccatgcggacgttccaccagggtggtgtcggc
ggtgacatcaccggtggtctgccgcgggtgcaggagctgttcgaggcccgggtgccgcgc
aacgaggcgccgatcgccgacgtcagcggccggatccggctcgaagaggacgacaagttc
tacaagatcaccatcatccccgacgacgggggcgaggaggtcgtctacgacaagctctcc
cgtcgtcagcggttgaaggtcatcaagcatcccgacgggacggagcggctgctcgccgac
ggcgaccacgtcgaggtgggccagcagctgctcgaaggttcggccaacccgcacgaggtg
ctgcgtgtgcaggggccccgcgaggtgcagatccacctcgtcaaggaggtccaggaggtc
taccgtgctcagggcgtgtcgatccacgacaagcacatcgaggtgatcgtccggcagatg
ctgcgccgcgtgaccatcatcgactcgggctcgacggagtttctgcccgggtcgctgacc
gagcgggcggagttcgaggccgagaaccgtcgggtggtggccgagggcggcgagcccgcg
gccggtcgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgattcgtggctc
agtgcggcgtcgttccaggagaccacgcgcgtgctgaccgatgcggcgatcaactgccgc
agcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccggccggt
accggtattccgcggtaccgcaacatccaggtgcagccgaccgaggaggcccgggccgct
gcgtacacgatcccgacctacgaggatcagtactacagccccgacttcggtcaggccacc
ggtgccgcggttccgctggacgactacggctacggcgactaccgctag
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