Mycolicibacterium thermoresistibile: 4412656_01001
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Entry
4412656_01001 CDS
T05542
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4412656_01001 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthn03021
]
4412656_01001 (rpoA)
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_01001 (rpoA)
Enzymes [BR:
mthn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4412656_01001 (rpoA)
Transcription machinery [BR:
mthn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4412656_01001 (rpoA)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4412656_01001 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF6327
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
SNW17197
LinkDB
All DBs
Position
1:1077416..1078471
Genome browser
AA seq
351 aa
AA seq
DB search
MLISQRPTLSEEPISEYRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYNVEA
TRVEQRTDFDKLILDVETKPSISPRDAVASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIAAFALPIDDLDLTVRSYNCLKREGIHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPAGFDPSQVAGYDASSGTWSNETGGYEQDNDQDYAETEQL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgccccacactgtccgaagagccgatctccgaataccggtcccgg
ttcatcatcgagccgctggaacccgggttcgggtacacgctcggcaactcgctgcgtcgc
acgctgctgtcgtcgattcccggcgcagccgtgaccagcatccggatcgacggtgtgctg
cacgagttcaccaccgtcccgggcgtcaaagaggatgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcctcggaggaggacgagcccgtcaccatgtacctgcgcaagcag
gggccgggtgaggtcaccgccgccgacatcgtgccgccggccggtgtcacggtgcacaac
ccggacatgcacatcgcgaccctcaacgacaagggcaagctcgaggtcgagctcgtcgtc
gaacggggccgcggctatgtgcccgccgtgcagaacaaggcctccggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaacgtcgaggcg
acccgcgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagccg
tcgatcagcccgcgggacgcggtcgcgtccgccggtaagaccctcgtcgagctgttcggg
ctcgcccgggagctcaacgtcgaggcggaaggcatcgagatcggcccgtcgccggccgag
gccgaccacatcgcggcgttcgcgctgccgatcgacgacctggatctgaccgtgcggtcc
tacaactgcctcaagcgggaggggatccacaccgtcggggaactggtcgcccgcaccgag
tccgacctgctcgacatccggaacttcggccagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctcggtctgtccctcaaggacagcccggccgggttcgatccgtcccaggtc
gccggctacgacgcgtcgagcggcacctggagcaacgaaaccggcggctatgagcaggac
aacgaccaggactacgccgaaaccgaacagctgtaa
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