Mycolicibacterium thermoresistibile: 4412656_01161
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Entry
4412656_01161 CDS
T05542
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mthn
Mycolicibacterium thermoresistibile
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthn03032
]
4412656_01161
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_01161
Enzymes [BR:
mthn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4412656_01161
DNA replication proteins [BR:
mthn03032
]
Prokaryotic type
DNA Topoisomerases
4412656_01161
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412656_01161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
SNW17356
LinkDB
All DBs
Position
1:complement(1246581..1247600)
Genome browser
AA seq
339 aa
AA seq
DB search
MTLRRSDPNRPGLRRVRRGRGFSYQDESGAAITDPATLRRIHDLTIPPAWREVWISPHPD
GHIQAVGRDAAGRRQYLYHAQWQEERSEEKFDRTLEMSAQLPAMRRQLLADLRGRGLSRD
RVLALALHLLDLGYFRAGGEQYAEENESFGIATLRCEHVSLQRSAVEFDYPAKSGVRRTW
SVADPDVMRAVRALLRRPDRGDRFLVCRITDRWVEVQADDLNERFRELVGADYTVKDLRT
WHGTVLAAVAFADADPPVDPKVVKRVESAVFNEVAEALGNTPAVARSSYVDPRVVQAYEH
GVTIAATTRRAERTRDPRERREILEAGTARMLRKVARGL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgcgccgcagcgatccgaaccgacccggattgcgcagggtgcgccgcggcaga
ggattctcgtatcaggacgagagcggtgcggcgatcaccgatccggcgacgctgcgacgg
atacacgatctgaccattccgccggcgtggcgggaggtgtggatcagcccgcaccccgac
gggcacatccaggcggtcgggcgcgacgcggccggccggagacagtacctctaccacgca
cagtggcaggaggaacgcagcgaggagaagttcgaccggacgctggagatgtcggcacaa
ctgcccgcgatgcggcggcagctcctcgccgatctccgtggccgcggactgtcccgtgac
cgggtgctggcgttggccctgcacctgctcgacctcgggtacttccgggcgggcggcgag
cagtacgccgaggagaacgagtcgttcggcatcgcgacgctgcggtgtgagcatgtctcg
ttgcagcgcagcgcggtcgagttcgactatccggccaagagcggtgtccgtcggacgtgg
tcggtcgccgacccggacgtgatgcgcgcggtgcgggccctgctgcgacggccggatcgc
ggggaccggttcctggtctgccggatcaccgaccggtgggtggaggtgcaggccgatgac
ctcaacgaacgattcagggagctggtcggtgccgactacacggtgaaggatctgcggacc
tggcacggcaccgtgctcgcggcggtggccttcgccgacgccgatccaccggtcgacccg
aaagtcgtcaaacgagtcgagtcggccgtgttcaacgaggtggccgaggcactcggaaac
acacccgcggtggcccggtcgtcctacgtcgatccccgcgtggtgcaggcctacgaacac
ggggtcaccatcgcggcgacgacccgccgcgccgagcgcacccgcgatccgcgggagcgg
cgggagatcctcgaggccggaacggcacggatgctgcggaaggtcgcccgcggactctga
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