Mycolicibacterium thermoresistibile: 4412656_01248
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Entry
4412656_01248 CDS
T05542
Symbol
pcrA_2
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03420
Nucleotide excision repair
mthn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4412656_01248 (pcrA_2)
03430 Mismatch repair
4412656_01248 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_01248 (pcrA_2)
Enzymes [BR:
mthn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4412656_01248 (pcrA_2)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412656_01248 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
4412656_01248 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SNW17443
LinkDB
All DBs
Position
1:1333992..1337261
Genome browser
AA seq
1089 aa
AA seq
DB search
MTARHSPADLAEALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
ARPDQVLGLTFTRKAAGQLLRRVRSRLARLAGTGLVPANSAPDWTTESVTVSTYHAFAGT
LLREHGLLLPVEPDTRLIGETELWQLAYRVVCEHPGPLDTDKTPAAITAMVLRLAGQLAE
HLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLNMLATQTERAALVPLIDAVHRR
MRAEKVMDFGMQMAAAARLASEHPQVGAALRQRFRVVLLDEYQDTGHAQRIALSALFGGG
VDDDLALTAVGDPIQSIYGWRGASATNLPRFATDFPHSDGSPAPTLELRTSWRNPPRTLH
LANAISAEARRRSVAVRALRPRPDAEPGTIRCALLDDVQSEREWVAEQLAALYRHARDAG
DTPPTAAVLVRRNADAAPMAQALTARGVPVEVVGLAGLLAVPEVADVVAMLRLAADPTAG
SAAVRILTGPRWRLGARDLTALWRRAVELGTVEPPGARPDTDGVEQILAGIGPDADEPCL
ADAICDPGDAAAYSEEGYRRITALAQELTALRAHLHHPLPDLIAEIRRILGVDAEARAGQ
PVAAGWAGTENLDAFADVVAEFAVRPNATVPALLGYLSAAMEVENGLAPADVTVATDRVQ
ILTVHAAKGLEWEVVAVPHLSRRVFPSTASPRTWLTDAGELPPLLRGDRATTSEHGVPVL
DTADVNDRKALSDKIAEHKNRLAQRRTDEERRLLYVAVTRAEDTLLVSGHHWGATESKPR
GPSEFLLEIKDVIDRSAEAGDPCGTIDLWAPEPPDGTPNPLRDKAFEVLWPAPPESRAVG
HTAAGAALVTAAMAGEVTGGLDPEGWAADVDALLAERDRAARPEPAPLPAQLSVSSLVEL
GRDPAATALIHRRLPARPDRNTLLGTAFHEWVQRYFHTDGLFDLDDLPGAVDVEPAAADA
AGLADLQNAFMTSPWAARTPTEVEVPFDMLIGDTVVRGRIDAVFADDDGGATVVDWKTGE
PPRTEDEMRQAAIQLGVYRIAWAAMRGLPVESVRAAFHYVRSGQTVQPDPLPTADDLAAL
LADADQRTR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcgtcacagccccgccgacctcgccgaggcgctcgggctcttcccgccgacc
gaggaacaggcggcggtgatcgccgcaccgcccggcccgctggtggtgatcgccggcgcc
ggcgccggcaagaccgagacgatggccgcccgggtggtgtggctggtcgccaacggctat
gcccgccccgatcaggtgctggggctgaccttcacccgcaaggccgccggccagctgctg
cgccgggtgcggagccggctggcgcggctggccggcaccggcctggtgccggcgaactcg
gccccggactggaccaccgagtcggtgaccgtcagcacctaccacgccttcgccggcacc
ttgctgcgcgagcacgggctgctgctcccggtcgagcccgacacccggctgatcggcgag
accgaactgtggcaactggcctaccgggtggtgtgcgagcatcccggcccgctggacacc
gacaagacccccgcggcgatcaccgccatggtgctgcggctggccggtcagctcgccgaa
catctggtggacaccgatcagctccgcgatacccacgtcgaactggaacggctggtgcac
accctgccggccggcccgtaccagcgcgaccgcggcccgagccagtggctgctgaacatg
ttggccacccagaccgaacgcgccgcgctggtaccgctcatcgacgcggtacaccgccgg
atgcgcgccgagaaggtgatggacttcggcatgcagatggccgccgcggcccggctggcc
tccgagcacccgcaggtcggcgccgcgctgcggcagcggttccgggtggtgctgctcgac
gaataccaggacaccggccatgcccagcggatcgcgctgtcggcgttgttcggcggcggt
gtcgacgacgacctcgcgctgaccgcggtcggggatccgatccagtccatctacggctgg
cgcggcgcgtcggcgaccaacctgccgcggttcgccaccgacttcccgcactccgacgga
agcccggcgcccaccctggaactgcgcaccagctggcggaacccgccgcgcaccctgcac
ctggcgaacgcgatctccgccgaggcgcggcgccgctcggtggcggtgcgggcgctgcgg
ccccggccggacgccgaaccgggcaccatccggtgtgcgctgctcgatgacgtgcagtcc
gaacgggagtgggtcgccgagcagctcgccgcactgtaccggcacgcccgcgacgccggg
gacaccccgccgacggccgcggtgttggtgcgccgcaacgccgatgccgcgccgatggcg
caggcgctcaccgcccggggtgtgccggtcgaagtggtcggcctggccggcctgctggcg
gtacccgaggtcgccgacgtcgtggcgatgctgcggctggccgccgacccgaccgcgggc
agcgccgcggtgcgcatcctgaccgggccgcgttggcgactcggtgcccgcgacctcacc
gccctgtggcggcgcgccgtcgagctgggcaccgtcgagcccccgggggctcgccccgac
accgacggtgtcgagcagatcctcgcgggcatcgggccggacgccgacgaaccgtgcctg
gccgacgccatctgcgatcccggtgatgccgctgcctactcggaggaggggtaccggcgc
atcaccgcactggcgcaggagctgaccgcgctgcgcgcgcacctgcaccatccgctgccc
gatctcatcgccgagatccgccggatactcggggtggacgccgaggcgcgggccggccaa
ccggtggccgcgggctgggcgggcaccgagaacctcgacgcgttcgccgacgtggtcgcc
gagttcgccgtccggcccaacgcgacggtgccggcgctgctgggctatctcagcgccgcg
atggaggtggagaacggtctggcgccggcggacgtcacggtcgccacggaccgggtgcag
atcctcaccgtgcacgccgccaagggcttggagtgggaggtggtcgcggtaccgcacctg
agccgtcgggtgtttccgtccaccgcatccccgcgcacctggctcaccgacgcgggggag
ttgccgccactgctgcgtggtgaccgcgccaccacctccgagcacggagtgccggtgctc
gacaccgccgacgtcaacgaccggaaagccctcagcgacaagatcgccgagcacaagaac
cggttggcgcaacgccgcaccgacgaggagcgtcggctgctgtacgtggccgtcacccgc
gccgaggacacgctgctcgtctccggacaccattggggggcaacggaatcgaaaccccgc
gggccgtccgagttcctcctggagatcaaggacgtcatcgatcggtcggccgaagccggc
gatccgtgcggaaccatcgacctgtgggcgccggaaccgccggacggcacgccgaacccc
ctgcgtgacaaggcgttcgaagtgctgtggccggcccctccggaaagccgcgccgtcggc
cacaccgccgccggcgcggcgttggtcaccgcggcgatggccggcgaggtcaccggcggt
ctggatccggagggctgggccgccgacgtggacgccctgctggccgaacgggaccgggcg
gcgcgacccgaaccggcgccgctgccggcccagctgtcggtcagctcgctggtcgagctc
ggccgcgacccggcggcgacagcgctgatacaccggcggctgccggcgcgcccggatcgc
aacaccctgctcggtacggcattccacgagtgggtgcagcggtacttccacaccgacggc
ctgttcgacctcgacgatctgcccggtgcggtggacgtcgaacccgccgcggcggacgcc
gccgggctggccgacctgcagaacgcgttcatgacctcgccgtgggcggcgcgcaccccg
accgaggtggaggtgccgttcgacatgctcatcggcgacaccgtggtgcggggtcgcatc
gacgcggtgttcgccgacgacgacggcggggcgaccgtggtggactggaagaccggggag
ccgccgcgcaccgaggacgagatgcggcaggcggcgattcagctcggggtgtaccggatc
gcgtgggcggcgatgcgcgggctgcccgtcgaatcggtgcgcgcggcgttccactacgtc
cgctccggtcagaccgtgcaacccgatccgctgccgaccgcggacgatctggccgcgctg
ctcgcagatgccgatcagcgcacccggtga
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