Mycolicibacterium thermoresistibile: 4412656_01998
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Entry
4412656_01998 CDS
T05542
Symbol
dnaE_2
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03030
DNA replication
mthn03430
Mismatch repair
mthn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4412656_01998 (dnaE_2)
03430 Mismatch repair
4412656_01998 (dnaE_2)
03440 Homologous recombination
4412656_01998 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthn03032
]
4412656_01998 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_01998 (dnaE_2)
Enzymes [BR:
mthn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4412656_01998 (dnaE_2)
DNA replication proteins [BR:
mthn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
4412656_01998 (dnaE_2)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
4412656_01998 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
SNW18180
LinkDB
All DBs
Position
1:2129967..2133503
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSSFVHLHNHTEFSMLDGAAKIGPLLAEAQRLEMSAIGMTDHGNMFGASEFYNAATDAG
IKPIIGVEAYIAPGSRFDTKRVQWGDPSQKSDDVSGSGAYTHMTMVAETADGLRNMFKLS
SLASFEGQLGKWSRMDAELIAEHATGIIATTGCPSGEVQTRLRLGHHREALEAAAKWRDI
FGPDNYFLELMDHGLDIERRVRDGLLEIGRKLNIPPLATNDCHYVTRDAAQNHEALLCVQ
TGKTLSDPNRFKFDGDGYYLKSAAEMRALWDDEVPGACDNTLLIAERVQSYADVWTPRDR
MPVFPVPEGHTQESWLRHEVRAGLQRRFPDGVPQEYLDRAEYEIEVICAKGYPSYFLIVA
DLVNYARSVDIRVGPGRGSAAGSLVAYALRITDIDPIEHGLLFERFLNPERASMPDIDID
FDDRRRGEMVRYAAEKWGHERVAQVITFGTIKTKAALKDAARVHYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIESDPDVRRIYETALGLEGLVRNAGVHAC
AVIMSSEPLIDAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDALENIK
ANRGIDLDLDTIPMDDPATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTSFDDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQPITPIHPELAEPLEEILAETYGLIVYQEQIMRIAQKVA
GYSLARADILRKAMGKKKREVLDKEYEGFSEGMKANGFSASAIKALWDTVLPFADYAFNK
SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVRDDKDKAAVYLADCRRLGITVLPPDVNE
SAVNFTSVGKDIRYGLGAVRNVGANVVSSLIATRTEKGKFTDFSDYLNKIDISVCNKKVT
ESLIKAGAFDSLGHPRKGLFLVHGDAVESVLGTKKAEAMGQFDLFGGDGSSEDSLDSVFT
IKVPDEEWDDKHKLALEREMLGLYVSGHPLEGVAHLLANQVDTQIPAILDGEVPNDAQVT
VGGILNSVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLYGAEIADDAVVLIKAKVA
ARDDRIALIAHELIVPDFSNASADRPIAVSLPTRQCTLDKVTALKQVLTNHPGTAQVHLR
LINGDRITTLELDPSLRVTPSLELMGDLKALLGPGCLG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctccttcgtgcacctgcataaccacaccgagttctcgatgctggacggtgcc
gcgaagatcgggccactgctggccgaggcgcaacggctggagatgtccgcgatcggcatg
accgaccacgggaacatgttcggcgccagcgagttctacaacgccgccaccgacgccggg
atcaagccgatcatcggggtggaggcctatatcgcgcccggttcccgcttcgacaccaag
cgggtccagtggggcgatcccagccagaagtccgacgacgtgtccggcagcggcgcctac
acccacatgaccatggtcgccgagaccgccgacggcctgcgcaacatgttcaagctgtcg
tcgctggcctcgttcgagggccagctcggcaagtggtcgcggatggacgccgagttgatc
gccgagcacgccaccggcatcatcgccaccaccggctgcccgtccggggaggtgcagacc
cggctgcggctcggccaccaccgggaggcgctggaggccgccgcgaaatggcgggacatc
ttcggcccggacaactacttcctcgagctgatggaccacggcctcgacatcgagcgccgg
gtacgcgacggtctgctggagatcggccgcaagctcaacatcccgccgctggccaccaac
gactgccactacgtcacccgggacgccgcgcagaaccatgaggcgttgctgtgcgtgcag
accggcaagaccctgtcggaccccaaccggttcaaattcgacggtgacggctactacctc
aagtccgccgccgagatgcgcgcgctgtgggacgacgaggtccccggggcgtgcgacaac
accctgctgatcgccgagcgggtgcagtcctacgccgatgtgtggaccccgcgggaccgg
atgccggtcttcccggtgcccgaggggcacacccaggagtcctggctgcggcacgaggtg
cgggccgggctgcagcgacggttcccggacggcgtcccgcaggagtacctggaccgcgcc
gagtacgagatcgaggtcatctgcgccaagggctacccgtcctacttcctgatcgtcgcc
gacctggtgaactacgcgcggtcggtggacatccgggtgggcccgggccgcggttcggcg
gccgggtcgctggtggcctacgcgctgcggatcaccgacatcgacccgatcgagcacgga
ctgctgttcgagcgtttcctcaaccccgaacgcgcgtcgatgcccgacatcgacatcgac
ttcgacgaccggcggcgcggcgagatggtgcgctacgccgccgagaagtgggggcatgag
cgggtcgcgcaggtcatcaccttcggcacgatcaagaccaaggccgcgctcaaggacgcc
gcccgggtgcactacggccaacccgggttcgcgatcgccgaccgcatcaccaaggcgctg
ccgccgccgatcatggccaaggacatcccgctgtccgggatcaccgatccgaaccatgag
cggtacaaggaggccgccgaggtccgcggtctgatcgagagcgacccggatgtgcgccgc
atctacgagaccgcgctcgggctggagggtctggtccgcaacgcgggtgtgcacgcgtgc
gcggtgatcatgagctccgaaccactgatcgacgcgatcccgctgtggaagcggccgcag
gacggcgccatcatcaccggctgggactacccggcgtgtgaggcgatcggcctgctgaag
atggacttcctcgggctgcggaacctgacgatcatcggcgacgcgctggagaacatcaag
gccaaccggggcatcgacctggatctggacaccatcccgatggacgatccggccacctac
gagctgctcggccggggcgacaccctcggggtgttccagctcgacggcgggccgatgcgc
gacctgctgcgccgcatgcagccgaccagtttcgacgacatcgtcgcggtgctggcgctg
taccggcccggtccgatgggcatgaacgcccacaacgactacgccgaccgcaagaacggc
cggcagccgatcaccccgatccaccccgagctcgccgagccgctggaggagatcctggcc
gagacctacggcctgatcgtctaccaggaacagatcatgcgtatcgcgcagaaggtcgcc
gggtactcgctggcccgagccgacattctgcgcaaggcgatgggcaagaagaagcgtgaa
gtgctcgacaaggagtacgagggcttctccgagggcatgaaggccaacgggttctccgcc
tcggcgatcaaggcgttgtgggacaccgtgttgccgttcgccgactacgcgttcaacaag
tcccacgccgccggatacgggttggtgtcctactggacggcgtatctgaaggccaactac
ccggccgagtacatggccgggctgctgacgtcggtccgcgacgacaaggacaaggccgcc
gtctacctggcggactgccgccggctcggaatcaccgtgctgccgccggacgtcaacgag
tccgcggtgaacttcacctcggtcggcaaggacatccggtacggtctgggcgcggtgcgc
aacgtgggcgccaacgtggtgtcgtcgctgatcgccacccggaccgagaagggcaagttc
accgacttctccgactacctcaacaagatcgacatctcggtctgcaacaagaaggtcacc
gaatccctcatcaaggcaggcgctttcgactctctcgggcacccccgcaaggggttgttc
ctggtgcacggcgacgccgtcgaatcggtgctcggcaccaagaaggccgaggcgatgggt
cagttcgatctgttcggtggtgacggatcgtctgaggactcgctcgattcggtcttcacg
atcaaggtgcccgacgaggagtgggacgacaagcacaagctggcgctggaacgggagatg
ctgggcctgtacgtgtccggtcatccgctcgagggggtggcgcacctgctggccaaccag
gtcgacacccagattccggcgatcctcgacggcgaggtgcccaacgacgcccaggtcacc
gtcggtggcatcctcaactcggtgaaccgccgcgtcaacaaaaacgggttaccttgggcc
tcagctcaattggaggacctcaccggcggcatcgaggtgctgttcttcccgcagacctac
tcgctgtacggggcggagatcgccgacgacgcggtcgtgctgatcaaggcgaaggtcgcc
gcccgcgacgaccggatcgcgctgatcgcccatgaactcatcgtgccggacttcagcaac
gcctcggcggaccggccgatcgcggtcagcctgccgacccgccagtgcaccctggacaag
gtcaccgcgctcaaacaggtgctgaccaaccacccgggcaccgcgcaggtgcatctgcgc
ctgatcaacggggaccggatcaccacgctggaactggacccgtcgctgcgggtgacaccg
tcgctggaattgatgggcgacctcaaggccctgctcggcccgggctgtctgggttag
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