Mycolicibacterium thermoresistibile: 4412656_03183
Help
Entry
4412656_03183 CDS
T05542
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4412656_03183 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthn03021
]
4412656_03183 (rho)
03019 Messenger RNA biogenesis [BR:
mthn03019
]
4412656_03183 (rho)
Transcription machinery [BR:
mthn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
4412656_03183 (rho)
Messenger RNA biogenesis [BR:
mthn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
4412656_03183 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
VWA_2
CoV_NSP2_C
TFIIA
Motif
Other DBs
NCBI-ProteinID:
SNW19342
LinkDB
All DBs
Position
1:complement(3373392..3375425)
Genome browser
AA seq
677 aa
AA seq
DB search
MTDTDLITADGGSGATELPNGVTSDVPKAAQAQSGAGSGAGSAPAADASTITNKSASLSS
MLLTQLRALAREIGVEGASGMRKGELVAAIQEHQSKQSSGAAHNDAADDPSGGKAQSRPR
RERRGASRSAGAPGGATAVADAPAQQELPVQPDKTVEDGGKKAESEIPAASAPATGSGAP
DAPAADRKAETKAAGSDAKPDSKSEGGRSQQADQQQADQQSNQPGQQAQPKDQQAQQAQQ
GQQAQKDQGQQQGQGASGDDDGDGRQGRRGRRFRDRRRRGERGDGGGETEVREDDVLQPV
AGILDVLDNYAFVRTSGYLPGPNDVYVSMNMVRKNGLRRGDHITGAVRVPKEGEGGGQNS
RQKFNPLVRIDTVNGGPVEDAKKRPEFSKLTPLYPNQRLRLETTPEKLTTRVIDLIMPIG
KGQRALIVSPPKAGKTTVLQDIANAIARNNPECHLMVVLVDERPEEVTDMQRSVKGEVIA
STFDRPPSDHTTVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGV
DSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKI
AERRVFPAVDVNPSGTRKDELLMSPDEFAIVHKLRRVLSGLDSHQAIDLLLSQLRKTKNN
YEFLVQVSKNTPGADND
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcatcacggccgatggcggcagcggcgcaaccgagctgcccaac
ggcgtgacctcggacgttcccaaagcggctcaggcccagtcgggggccggttccggggcc
ggctctgccccggccgccgacgcgtcgaccatcaccaacaagtccgcgtcgttgtcctcg
atgctgctgacgcagcttcgggcgctggcccgcgagatcggcgtcgagggcgcctccggc
atgcgtaagggcgagctggtcgccgccatccaggagcatcagagcaaacagtcttcgggt
gcggcccacaacgacgccgccgacgatccgtccggcggcaaggcgcagagccggccgcgg
cgtgagcgtcgtggcgccagccgcagcgctggcgccccgggcggggccaccgctgtggcc
gatgcgccggcccagcaggagctgcccgttcagccggacaagaccgttgaggacggcggg
aagaaggccgaatccgagatcccggcggcgtccgcgccggcgaccgggtccggtgcgccc
gatgcgccggccgctgaccggaaggccgagacgaaggccgccggctccgacgccaagccg
gacagcaaatccgagggtgggcgttcgcagcaggccgaccagcagcaggccgaccagcag
tccaatcagccggggcagcaggcccagccgaaggatcagcaggcccagcaggcccagcag
ggccagcaggcccagaaggatcagggccagcagcagggccagggcgcatccggcgacgac
gacggtgacggccggcagggccggcgcggccggcggttccgtgaccggcgccggcgcggc
gagcgcggcgacggcggcggtgagaccgaggtgcgcgaagacgacgtgctgcagcccgtc
gcgggcatcctcgacgtgctcgacaactacgcgttcgtgcgcacctcggggtatctgccc
ggcccgaacgacgtctacgtgtcgatgaacatggtgcggaagaacgggttgcgccgcggt
gaccacatcaccggcgcggtccgggtgccgaaggagggtgaaggcggcggccagaactcc
cggcagaagttcaatccgctggtgcgtatcgacaccgtcaacgggggaccggtcgaggac
gccaagaagcgtcccgaattcagcaaactcacaccgctgtatccgaaccagcggctgcgg
ctggagaccacgccggagaagctgaccacccgagtcatcgacctgatcatgccgatcggc
aaggggcagcgcgcgctgatcgtgtcgccgccgaaggccggtaagaccacggtcctgcag
gacatcgccaatgcgatcgcccgcaacaaccccgagtgccacctgatggtggtgctggtc
gatgagcggccggaagaggtcaccgacatgcagcgctcggtcaagggcgaggtcatcgcc
tcgaccttcgaccgcccgccgtccgaccacaccacggtcgccgagctcgccatcgaacgg
gccaagcggctggtggagcagggcaaggacgtcgtcgtgctgctggactcgatcacccgc
ctgggccgggcgtacaacaacgcctcgcccgcctcgggccgcatcctgtccggtggtgtc
gactcgaccgcgctgtacccgcccaagcggttcctcggcgcggcccgcaacatcgaagag
ggcggctcgttgacgatcatcgccaccgcgatggtggagaccggctcgaccggtgacacg
gtgatcttcgaggagttcaagggcaccggcaacgccgagctcaagctggaccgcaagatc
gccgagcggcgggtgttcccggccgtcgacgtcaacccgtccggcacccgcaaggacgag
ctgctgatgtcgcccgacgagttcgcgatcgtgcacaagctgcgccgcgtactcagtggt
ctggacagccatcaggccatcgacctgttgctcagccagctgcgcaagaccaagaacaac
tacgagttcctggtgcaggtctcgaagaacacgccgggcgccgacaacgactga
DBGET
integrated database retrieval system
