Mycolicibacterium thermoresistibile: 4412656_03889
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Entry
4412656_03889 CDS
T05542
Name
(GenBank) DNA or RNA helicase of superfamily protein II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mthn
Mycolicibacterium thermoresistibile
Pathway
mthn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4412656_03889
09124 Replication and repair
03420 Nucleotide excision repair
4412656_03889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthn03021
]
4412656_03889
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_03889
Enzymes [BR:
mthn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4412656_03889
Transcription machinery [BR:
mthn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
4412656_03889
DNA repair and recombination proteins [BR:
mthn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
4412656_03889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
SNW20040
LinkDB
All DBs
Position
1:4111533..4113182
Genome browser
AA seq
549 aa
AA seq
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MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVTYSRYAVPQPLLVDVVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVL
RHKKIAPMLGARIDEDTVAVHPSERGRIKQMLLKIGWPAEDLAGYVDGESHPIRLEQNGW
QLRDYQQMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAEATTLILVTNTVAGRQWKRE
LIARTSLTENEIGEYSGERKEIRPVTIATYQVITRRSKGVYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYATAEPEERYKLCSTAHTKVAVVKSILERHQGEQTLVIGAYLE
QLEELGRELDAPVIQGSTKTAEREALFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggacctctgatcgtgcagtccgacaagacggtgctgctcgaagtcgatcac
gagctggcgggtgcggcccgggccgcgatcgccccgttcgccgagctcgaacgcgccccc
gagcatgtgcacacctaccgcatcaccccgctggcgttgtggaacgcgcgcgcggccggg
cacgacgccgaacaggtggtcgacgcgctggtgacctattcgcgctacgcggtgccgcag
ccgctgcttgtcgacgtcgtcgacaccatggcccggtacggccggctgcagctggtgaag
catccggcgcacgggctcacgctggtcagcctggaccgcgcggtgctggaggaggtgctg
cggcacaagaagatcgccccgatgctcggcgcccgcatcgacgaggacaccgtcgcggtg
catcccagcgaacgcggccggatcaagcagatgctgctcaagatcggctggccggccgag
gacctcgccggctacgtcgacggggagtcgcatccgatccgcctcgagcagaacggctgg
cagctccgtgactatcagcagatggcggcggactcgttctggtccggcggctcgggtgtg
gtggtgttgccgtgcggcgccggtaagacgctggtcggcgcggcggccatggccaaggcc
gaggccaccacgctgatcctggtcaccaacacggtggcgggccggcagtggaaacgcgag
ttgatcgcccgcacctcgctgaccgagaacgagatcggcgagtactccggcgaacgcaag
gagatccggccggtcaccatcgcgacgtatcaggtcatcacccgccgcagcaagggggtg
tacaagcatctggaactgttcgacagccgcgactgggggctgatcatctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgaccgccgatctgcagtcgcggcggcggctc
gggctgaccgccacgctgatccgcgaggacggccgggagggcgacgtgttcagcctgatc
ggcccgaaacggtatgacgcgccgtggaaggacatcgaagcccagggctggatcgcgccg
gccgagtgcatcgaggtgcgggtgacgatgaccgacaacgagcggatgctgtacgcgacg
gccgaacccgaggaacgctacaagctgtgctcgacggcgcacaccaaggtcgcggtggtc
aagtcgatcctggaacggcaccagggtgagcagaccctggtgatcggcgcctatctggag
cagctcgaagagctcggcagggaactggacgccccggtcatccagggctcgaccaagacc
gccgaacgcgaggcgctcttcgacgcgttccgccgcggggagatctccacgctggtggtg
tccaaggtcgcgaacttctccatcgacctgccggaagcctccgtggcggtgcaggtttcg
gggacgttcggttcgcggcaggaggaggcccagcggctgggccggctgctgcggccgaag
gccgacggcggcggcgcggtgttctactcggtggtgtcgcgcgacagcctcgacgccgaa
tacgcggcccaccgtcagcggttcctggccgagcaggggtacggctacatcatcaaggac
gccgacgacctactcggcccggcgatctga
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