Mycolicibacterium thermoresistibile: 4412656_04242
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Entry
4412656_04242 CDS
T05542
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mthn
Mycolicibacterium thermoresistibile
Brite
KEGG Orthology (KO) [BR:
mthn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthn03032
]
4412656_04242 (topA)
03400 DNA repair and recombination proteins [BR:
mthn03400
]
4412656_04242 (topA)
Enzymes [BR:
mthn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4412656_04242 (topA)
DNA replication proteins [BR:
mthn03032
]
Prokaryotic type
DNA Topoisomerases
4412656_04242 (topA)
DNA repair and recombination proteins [BR:
mthn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412656_04242 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
SNW20385
LinkDB
All DBs
Position
1:complement(4439160..4442015)
Genome browser
AA seq
951 aa
AA seq
DB search
MAEQDRGSGRNGSVRRLVIVESPTKARKIAGYLGSDYIVESSRGHIRDLPRNAADVPAKY
KSEPWARLGVDVDNDFQPLYIISPDKKSTVTELKNKLKEADELYLATDGDREGEAIAWHL
LETLKPKVPVKRMVFHEITESAIRNAAENPRDLDTALVDAQETRRILDRLYGYEVSPVLW
KKVAPKLSAGRVQSVATRIIVQRERERMAFRSASYWDVTAQLDASVSDPQASPPVFAAKL
STVDGRRVATGRDFDSRGVVKKPDEVLVLDESDANALVAGLRNVQLTVTSVEQKPYTRRP
YAPFMTSTLQQEAGRKLRFSAERTMSIAQRLYENGYITYMRTDSITLSQSAINAARNQAR
QLYGEEYVHPTPRQYSRKVKNAQEAHEAIRPAGDVFATPGQLANELAPDEFRLYELIWQR
TVASQMADARGTTLSLRISGTTADGRQVVFTASGRTITFPGFLKAYVESIDELAGGESDD
AERRLPNLTEGQRVDAVDLTADGHQTNPPPRYTEASLVKALEELGIGRPSTYASIIKTIQ
DRGYVHKRGSALVPSWVAFAVTGLLEQHFSRLVDYDFTAAMEDELDEIAAGNEQRTNWLH
NFYFGGEHGVEGSIARAGGLKKLVGVNLEEIDAREVNSIKLFDDDQGRPIYVRVGKNGPY
LERMVIGEDGEPTPQRANLKEALTPDELTLDLAEKLFATPQEGRSLGIDPETGHEIVVKD
GRYGPYVTEILPEPDDGGDDGSAGSPAKKGRKPTGPKPRTASLLRSMDIETVTLDDALKL
LSLPRVVGVDPNTGEEITAQNGRYGPYLKRGSDSRSLASEEQLFTITLDEALKIYAEPKR
RGRQAAAAPPLRELGEDPATGKPIVVKDGRFGPYVTDGETNASLRKGDDVETLTVERASE
LLADRRARGPVKRAKKTAAKKTAAKKTAAKKTAAKKTAAKKTAAKKAAKKS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaacaggaccgcggtagcggtaggaacggaagcgtccggcgtctcgtcatcgtc
gagtcaccgaccaaggcccgcaagattgctggttacctgggctccgactacatcgtggaa
tcgtcgcgtggacacattcgcgacctgccgcgcaatgccgccgacgtgcccgccaagtac
aagtccgagccgtgggcccgcctcggggtcgacgtcgacaacgactttcagccgctctac
atcatcagtccggacaagaagagcaccgtcaccgagctgaagaacaagctcaaagaggcc
gacgagctctatctggccaccgacggtgaccgcgagggtgaggccatcgcctggcatctg
ctggaaaccctcaaacccaaggtgccggtcaagcggatggtcttccacgagatcaccgaa
tcggccatccgcaacgccgccgagaacccgcgggacctcgacaccgcgctggtcgacgcc
caggagacccgccgcatcctggaccggctgtacggctacgaggtcagcccggtgctgtgg
aagaaggtcgcgccgaagttgtcggcgggccgggtccagtcggtggcgacccgcatcatc
gtgcagcgcgaacgcgagcggatggcgttccgcagcgcctcctactgggacgtcaccgcg
cagctggacgcctcggtctccgacccgcaggccagcccgccggtgttcgcggccaagctg
agcaccgtcgacggccggcgggtggccaccggccgcgacttcgactcgcgcggcgtggtc
aagaagcccgacgaggtgctcgtcctggacgagtccgacgccaacgcgctggtcgccggg
ctgcgcaatgtgcagctgacggtgacctccgtcgagcagaagccctacacccggcggccc
tatgcgccgttcatgacctcgacgctgcagcaggaagccggccgcaagctacggttctcc
gccgaacgcacgatgagcatcgcgcagcggctctacgagaacggctacatcacctacatg
cggaccgactcgatcacgctgtcgcagtcggccatcaacgccgcccgcaaccaggcccgc
cagctctacggcgaggagtacgtccaccccacgccgcggcagtactcccgcaaggtcaag
aacgcccaggaggcgcacgaggcgatccggccggccggcgacgtgttcgccacgccgggc
cagctggcgaatgagctcgctcccgacgagttccggctctacgagttgatttggcagcgg
accgtggcctcgcagatggccgatgcgcgcgggaccacgctgagcctgcgcatctcgggc
accaccgccgacggccggcaggtggtgttcaccgccagcggccgcaccatcaccttcccg
ggcttcctgaaggcctatgtggagagcatcgacgagctggccggcggggagtccgacgac
gccgagcggcggctgccgaacctcaccgaggggcagcgggtcgacgcggtggatctgacc
gccgacgggcatcagaccaatccgccgccgcggtacaccgaggcgtcgctggtcaaggcg
ctcgaggagctcggcatcggccggccgtcgacgtacgcgtcgatcatcaagaccatccag
gaccgcggctacgtgcacaaacggggcagcgcgctggtgccgtcgtgggtggcgttcgcg
gtcaccggactgctcgaacagcacttcagccggttggtcgactacgacttcaccgcggcg
atggaggacgaactcgacgagatcgctgccggcaacgagcagcggaccaactggctgcac
aacttctacttcggcggcgagcacggtgtggagggctcgatcgcccgcgccggcgggctg
aagaagctggtgggcgtcaacctcgaggagatcgacgcccgcgaggtcaactcgatcaag
ctcttcgacgacgatcagggccgcccgatctacgtccgggtgggcaagaacgggccgtac
ctggagcggatggtcatcggagaggatggtgagcccaccccgcagcgggccaacctcaaa
gaggcgctgacccccgacgagctcaccctggatctggccgagaagctgttcgccaccccg
caggaggggcggtcgctgggcatcgacccggagaccggccacgagatcgtcgtcaaggac
ggccgctacggaccgtacgtcaccgagatcctgcccgaacccgacgacggcggggatgac
ggctcggcgggcagcccggccaagaagggcaggaagccgaccggcccgaaaccgcgcacc
gcctcgctgctgcggtcgatggacatcgagacggtgacgctcgacgacgcgctgaagctg
ctgtcgctgccccgggtggtcggcgtcgacccgaacaccggcgaggagatcaccgcgcag
aacggccggtacggtccatacctcaagcgcggcagcgattcccggtcgctggccagcgag
gagcagctcttcaccatcacgctggacgaggcgttgaagatctacgccgaacccaagcgc
cggggccggcaggccgccgcggcgccgccgctacgcgaactgggtgaggatccggccacc
ggcaaaccgatcgtggtcaaggacggccgcttcggcccgtacgtcaccgacggggagacc
aacgccagcctgcgcaagggtgacgacgtggagacgctgaccgtggagcgggcctccgag
ctgttggccgaccggcgggcccgcggcccagtgaagcgggccaagaagaccgccgcgaag
aagaccgccgccaagaagaccgcggccaagaagaccgcggccaagaagaccgcggccaag
aagaccgccgccaagaaagcggcgaagaagagttaa
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