Neomoorella thermoacetica DSM 521: MOTHE_c04190
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Entry
MOTHE_c04190 CDS
T06431
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mtho
Neomoorella thermoacetica DSM 521
Brite
KEGG Orthology (KO) [BR:
mtho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtho03400
]
MOTHE_c04190 (addB)
Enzymes [BR:
mtho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOTHE_c04190 (addB)
DNA repair and recombination proteins [BR:
mtho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MOTHE_c04190 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AKX93232
LinkDB
All DBs
Position
402861..406316
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AA seq
1151 aa
AA seq
DB search
MALRLVLGRAGSGKTRLCLEEIKAILAEGPAGPALIILTPEQATLQMELDLHRAAGVPGF
SRVQVLSFRRLGWRVFQEAGGAARPHLGEMGKAMALRAVVSAHRDDLGLFAPLAGSPGFI
EQLAHTIAELKLYRVTPADLDRILERYRETGREQTILARKLRDLALVYRELETYLAGRYL
DPDDYLTLLAGRLPEAAFIRGARVWVDGFNGFTPQEEAVLQALMAVAEQVTVTLCLDPTL
RHRRLGETELFHPTGETYHRLRQLALAAGVRVEDDVCLAGTPPRFREAPALAHLEAHFGR
WPLRPFRGDAAGIRLVAAANRRVEVEAAAREILRLAREENLSWRQMAVLVRDLEPYHDLI
VNTFRDFNIPLFIDRRRPVGHHPLVELVRAALEAVLEDWAYDPVFRYLKSDLVPVPREEI
DLLENYVLAHGIRGRRWRDSRPWQYGNSRDLETPSPPGSAAGETINAIRERASCHLRRFD
GALRGRQLTGREITAALFDLLQELGVPERLAAWSRQAAAAGDLDAAQEHEQIWEGLMDLL
EELVLALGDTSLELEEYAAILDTGLESLKLRLIPPALDQVVAGTLDRSRQPELQAAFVLG
VGEGVLPARLPEDATFSDREREELRAAGLELAPTGTLRLFHEEFLAYLALTRSRRYLWLS
YPLADAEGKALSPSPLVRRLRQLLPGLREETAGTELPGGDDDLVYLTTPRQAAGHLARLL
GRGRPLPPLWQEVYRWLHQDARGQKMLGLLEGGGYRNQVDPLEPELARGLYPRPLRLSIS
QLETFAGCPFRYFLSYGLGLQERRLYQVDPAGMGQFYHAALKLFVEELGRRGLDWGRLSD
NEAAAIISQVVDSLAPALQHEILSSNARYGYLRKKLEQTLQRVMEVLNEHARRGEFRPLA
VETSFGCRGKLPPLQLDAGPGRRVFLEGRVDRIDVARRQGRPYLRVIDYKSSPTTLDLTA
VYYGLALQLPLYLRAALDAAPELLGEAAEPAGMLYFAVRNPLIRQRGPVGKEAAARLRRQ
ELKMRGLLLDDVEVIKLMDREIAASPDLLPLRLNKDGSLRKGAPVAGREEMALLLDLALA
RAAELAGAILSGRVEISPYRRGQETACDFCPYRPVCAFDPQIPGSGYRRLGNLPGDFWQL
AAAFLGSQMKG
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
ttggctttacgtctggtcctgggccgcgccgggtcgggcaaaacgcgcctctgccttgag
gagataaaggcgatcctggcggaggggccggcaggcccggccctcattatcctcaccccg
gagcaggccaccctgcagatggaactggacctgcaccgggcggctggtgttcccggcttc
agccgggtccaggtgttgagctttcgccgcctgggctggcgagtcttccaggaagccggc
ggcgcggcccggccccacctgggcgagatgggcaaggctatggccctgcgggcggtagtg
agcgcccaccgggacgaccttggccttttcgctcccctggccgggagcccgggctttatc
gagcaactggcccacaccatcgccgagttgaagctctaccgggtaacgccggcggacctg
gacagaatcctggagaggtaccgggagacaggccgcgagcaaaccatcctggcccgcaag
ctccgggacctggccctggtctaccgggagctggagacttacctggcggggcgctacctg
gaccccgacgactatctcaccctcctggccggtcggctgccggaagcagcctttatccgg
ggagcacgggtttgggtcgacggctttaatggttttactccccaggaggaggccgttctc
caggccctgatggccgtcgcggagcaggtaaccgtcaccctgtgcctggacccgaccttg
aggcaccggcggctgggggagacggagctctttcaccccaccggcgagacctatcaccgc
ctgcggcagctggccctggcagccggggtccgggtggaagacgacgtctgcctggcggga
accccgccccgtttccgggaggcgccggccctggcccacctggaagcccatttcggccgc
tggcccctgcggccattccggggcgatgcggcaggcatcaggctcgtggccgctgccaac
cgccgggtggaggttgaggcggcagccagggagatcctgcgcctggccagggaggagaac
ctatcctggcggcagatggccgtcctggtacgggacctggagccctatcacgaccttatc
gtcaacacctttcgcgattttaacatccccttgttcatcgaccgccgccggccggtgggc
caccacccattggtggaactggtccgggccgccctggaggccgtcctggaggactgggcc
tatgatcccgtgtttcgttatctcaagagcgacctggtgcccgttccccgcgaggagatc
gacctcctggagaactacgtcctggcccacggcatccgcggccgccggtggcgcgatagc
cggccctggcagtatggaaattcccgggatctggaaaccccttcgccgccgggcagtgcc
gccggcgaaaccattaacgctatccgggagcgggccagctgccacctgcggcgcttcgac
ggggccctccggggccggcaactgacgggacgggagataaccgcagccctctttgacctc
ctgcaggagctgggggtgccggaacggctggctgcctggagccggcaggcggccgctgcc
ggggatctggacgccgcccaggaacacgagcagatctgggaaggcctcatggacctcctg
gaggaactggtgttagccctgggcgatacttccctggagctggaggagtatgccgccatc
ctggataccggcctggagagcctgaagctccgcctcatccccccggccctggatcaggta
gtcgccggtaccctggaccgctcccgccagccggaactccaggcggcctttgttctgggg
gtcggtgaaggggtcctgccggcccggctgcccgaggacgccaccttcagcgaccgggaa
agggaggaactgcgggcggccggcctggagctggcccctacgggaaccctgcgtctcttc
cacgaggaattcctggcctacctggccctgacccgctcccgccgctacctgtggctgagt
taccccctggccgacgccgagggcaaagccctctctccctcgcccctggtgcgccgcttg
cgacaactgctgccgggccttagggaagagaccgccggcacggagctccccgggggcgac
gacgacctggtttacctgaccacgccacgccaggcggccggccaccttgcgcgcctcctg
ggccggggtcggcccctgccacccctgtggcaggaggtttaccgctggttgcaccaggac
gccaggggacaaaaaatgctgggcctcctggagggaggggggtatcgcaaccaggtggac
cccctggaaccggagttggcccggggcctctacccccggcccctgcggctcagcatctcc
cagctggagacctttgccggctgccccttccgctattttttaagctacggcctggggtta
caggaacgccgcctctaccaggtggaccctgccgggatgggccagttctatcacgccgcc
ctgaagctatttgtcgaagagctgggccgccggggccttgactggggccggctcagcgac
aacgaagcagcggccatcatcagccaggtcgttgacagcctggcacctgcactgcagcat
gagatcttgagcagcaacgctcgctacggctacctgcggaaaaagctcgagcagaccctg
cagcgggtaatggaggtcctcaacgagcatgcccggcggggcgagtttcgtcccctggct
gtggaaacgagttttggctgccgggggaagctgccgcccctgcaactggacgccggaccc
ggccgaagagttttcctggaggggcgggtggaccggatcgacgtggcccggcgccagggg
cgcccctacctgcgggtgatcgactacaagagcagccccaccaccctggacctcacagcc
gtctattacgggctggccctgcagttgcccctctacctgcgggcggccctggacgcggcc
ccggagttgctgggggaggcggccgagccggccggcatgctttactttgccgtcaggaac
cccctgatccggcaaaggggcccggttggaaaggaggccgccgccaggctccgccgccag
gaattgaagatgcgcggcctgctcctggacgatgtggaagtgatcaagcttatggaccgg
gagatagcagccagcccggacctgctgccgctccgcctgaataaagacggcagcctgcgc
aagggcgcgccggtggccggccgggaggagatggcgctccttttggacctggccctggcc
agggcggctgaactggccggcgccatcctctccggccgggtggagatcagcccctaccgc
cggggccaggaaacagcctgcgatttttgcccctaccggccggtatgcgcctttgacccc
cagatcccgggcagcggttaccgccgcctgggaaacctgccgggggatttctggcaactg
gccgccgcttttctggggagccagatgaaagggtga
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