Neomoorella thermoacetica DSM 521: MOTHE_c16880
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Entry
MOTHE_c16880 CDS
T06431
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mtho
Neomoorella thermoacetica DSM 521
Pathway
mtho03410
Base excision repair
mtho03430
Mismatch repair
mtho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOTHE_c16880 (recJ)
03430 Mismatch repair
MOTHE_c16880 (recJ)
03440 Homologous recombination
MOTHE_c16880 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtho03400
]
MOTHE_c16880 (recJ)
DNA repair and recombination proteins [BR:
mtho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MOTHE_c16880 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MOTHE_c16880 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MOTHE_c16880 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ThiG
ssDNA-exonuc_C
CDC45
Motif
Other DBs
NCBI-ProteinID:
AKX94481
LinkDB
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Position
complement(1613764..1616520)
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AA seq
918 aa
AA seq
DB search
MTGTQWAMPPVNLPERLALARELHISPITAQILINRGITTAAAARAFFQPDPANLIPPEK
IPGLPAARERLVQAIEKREKIMVHGDYDVDGLAATAIMLETLARLGVEAEVYLPDRLTEG
YGLKKKSLIKALELNCQLVITVDCGITSLEEAIFAREQGLDLIITDHHRPGTSLPQASAV
VNPLLAPGLPPLCGAGVAFKLAQSLATHFGLAPQGGVAAGWALDLVALATIADAVPLLGE
NRLLVQLGLKALSGSMRPGLKALAEVAGLPAREWTAREVAFGLVPRLNACGRLGNAMPAL
EILLTSSPQRALELAQRLQEENQARRHLEESIAAEAEAMAVTALAAGAKGLVLAAEGWHP
GVTGIIAARLVEKYNCPVVLIAVVGDRGRGSGRSLPGINLHEIFARCRSYLLSFGGHARA
GGLEIAAKEIPAFQAAFNEIVKSLMAEVQTPPEVAPEAEVLVSQLDWQLLEELEQLAPFG
EGNPRPVLVTRRALIKAARQVGRDGAHLKLTAGGEGREIGAIGFNLSLPPGLSPGHHVDL
AFYLERNTYRDREELQLRLVALKAAETGATLPERAEGMVAATGEDGPAPTWGRQLQELLA
TYGPRVRVCLATTAAVRQAYNGCRRFFQVPETLQPLGPWLGRAGVERVLSRARGLITCSP
FWPVTPAGKEALLASPLAAADLPPEQLLRPAGDPAALEVWPELLPLLTAGLERGERILLY
AATGRIPWLVSWLAGALPGVPLAVDTYSDYRQFALAREGALAGRLPLLVARREVPAWFYP
ADLVVFTYLPDSLEEVELALPPGEKVPRVAILLAAGDRPVPDLRQELAVFYRRLQKLLGN
GRGLYIVNNKGYHQLCYLAIFEELGLIQVTSRDQGLFIQPLEVETKRDLMASRRYRQLRA
ERELARQFRRQLPGGEVR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggaacccagtgggccatgcctccagtaaacctgccggagaggctggccctggcc
cgggagttacatatctcacctataacagcgcaaattctcattaaccggggcataactaca
gcggcagcggccagggcttttttccagccggacccggccaatcttatcccgccggagaaa
attcccggcctgccggcggcccgggagcgcctggtccaggccatagaaaagcgggaaaaa
attatggtccatggtgactatgatgtcgacggtctggcggccacggccattatgctggaa
accctagcgcgcctgggggttgaggctgaagtttacctgcccgaccgtctaacggagggt
tatggtttaaaaaagaagagcctcattaaagccctggagttaaattgtcagctggtcata
acggtagactgtggcattacttccctggaggaggccatcttcgcccgggaacaaggtctg
gacctgattattaccgaccaccaccgacccgggacaagcctgccccaggcgagtgccgta
gttaatcccctgctggcaccgggcctgcctcccctatgcggcgccggggtggccttcaaa
ctagcccagtccctggcgacccactttggtctggcaccccagggaggtgtggccgccggc
tgggccctggacctggtagccctggcgactatcgctgacgccgtacccctcctgggagaa
aaccgcctcctggtccagctgggtttaaaggccctgtccggtagcatgcggcctggcttg
aaagccctggcagaggtggcaggtctaccggccagggagtggacggcccgggaagtggcc
tttggccttgttccccgtttgaatgcctgcggccgcctgggaaatgccatgccggccctg
gaaattttgctaacttcttctccccagcgggccctggaactggcccagcgcctgcaggag
gaaaaccaggcccggagacacctggaggagagcattgccgccgaggctgaagccatggcc
gtgacggctttagctgcaggagcaaaaggcctggtcctggcggccgagggctggcacccg
ggagtaactggcattatcgccgcccgcttggtggaaaaatataactgtccggttgtttta
atagccgtggtaggcgataggggccggggttcgggacgtagcctcccgggtatcaatctc
catgaaatcttcgccaggtgccgttcctacctcctgtcctttggcggtcatgcccgggca
gggggactggaaatcgccgccaaagaaataccggctttccaggccgcctttaatgaaata
gtaaagtcactcatggctgaggttcaaacgcctcccgaagtagcgcctgaggcggaggtc
cttgtcagccagctggactggcagctcctggaggaattagagcagctggccccctttggc
gaagggaatccccggcccgtcctggttacccgccgcgccctgattaaggccgcccgccag
gtgggcagggacggcgcccacctgaagctgactgccggcggggaaggtagggaaattggg
gccattggctttaacctctccctgccgccggggttgtctcccgggcatcatgttgacctg
gccttttacctggaacgcaacacctaccgggaccgggaggaactgcagctaaggctcgtg
gccctgaaagcggcggaaacaggagcaacactaccggaacgggcggaaggaatggtggcg
gccaccggtgaagacggcccggcaccgacctggggccggcagctccaggaattgcttgct
acctatggcccacgggtacgagtatgcctggcgacgacggcggctgtacgccaggcctat
aacggctgcaggcgttttttccaggtgccggaaaccctgcaacccctgggcccctggctg
ggccgggccggggtggaacgggttttgagccgggcccgggggttaattacctgcagcccc
ttctggccggtaacacccgccgggaaagaggcgctcctggcctcgcccctggcggccgct
gatctgccgccggagcaattactgcggcctgccggcgacccggcggccctggaggtatgg
ccggagctattacccctattgactgccggcctggaaaggggcgagcgcatcctcctctat
gccgctaccggcagaattccctggctggtaagctggcttgccggcgccctgcccggcgta
cccctggcggtggatacttatagtgactaccggcagtttgccctggcccgggaaggagcc
ctggccggccggctccccctgctggtggcccggcgggaggttccggcgtggttttacccg
gccgacctggtggtctttacctatcttcccgacagcctggaggaggtggagctggccctc
cctccgggtgaaaaagtgccccgggtggctattctcctggcggctggggacaggccggtc
ccggatttgcgtcaggagctggcggtattttaccgccggttacagaagctgctgggcaac
ggccgcggtctttacatagttaataataagggatatcatcaattatgttacctagctatc
tttgaagaactcgggctgatccaggtcaccagccgggatcagggtttatttatccagcca
ttggaagtagaaaccaaacgcgacctgatggcttccagacgctaccggcagctccgggcc
gaaagggaactggcccggcaattcaggcgacaactgccgggaggggaggtgcggtaa
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