Neomoorella thermoacetica DSM 521: MOTHE_c25490
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Entry
MOTHE_c25490 CDS
T06431
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mtho
Neomoorella thermoacetica DSM 521
Pathway
mtho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOTHE_c25490 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtho03021
]
MOTHE_c25490 (rpoB)
03400 DNA repair and recombination proteins [BR:
mtho03400
]
MOTHE_c25490 (rpoB)
Enzymes [BR:
mtho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOTHE_c25490 (rpoB)
Transcription machinery [BR:
mtho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOTHE_c25490 (rpoB)
DNA repair and recombination proteins [BR:
mtho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOTHE_c25490 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AKX95328
LinkDB
All DBs
Position
complement(2473573..2476998)
Genome browser
AA seq
1141 aa
AA seq
DB search
MAYPVKVGARERWTFAKIKETLELPNLIEIQRNSYQWFIDTGLRELFHDISPIQDFTGNL
ILQFVDYSLGEPKYSEDECKERDMTYAAPLRVKVRLINRETGEVKEQEVFMGDFPLMTDK
GTFIINGAERVIVSQLVRSPGAYYAEGIDASGTKVYGATVIPNRGAWLEFETDNTESIYV
RIDRTRKIPVTILLRALGYNTNARILELFDYDGRIQNTLEKDNTESEEEALVEIYKRLRP
GEPPTVDSARNLLESLFFDPRRYDLGNVGRYKLHKKFNHGILTREVDGREEYIRTLTKED
IIYTIKYLLRLMDGEVKPDDIDHLGNRRLRSVGELLQNQFRIGLARMERVVRERMTIQDV
DVITPQVLINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAG
FEVRDVHTSHYGRMCPIETPEGPNIGLIGSLSTYARINEFGFIETPYRRVDKEKGIVTNQ
VDYLTADEEDKYFIAQANAPLDEEGHFLEKRVNARHGGEILVVPASQVDYMDVSPKQMVS
VATALIPFLEHDDANRALMGANMQRQAVPLLRTEAPIVGTGMEWRAARDSGTVVLARNNG
VVERVTAREIVIRTDNGHLETYRLQKFVHSNQGTCINQKPIVRKGERVSAGQTIADGPST
DQGELALGRNILVAFMTWEGYNYEDAILISEKLVKDDIFTSIHIEEYECDARDTKLGPEE
ITRDIPNVSEDVLKDLDERGIIRIGAEVRPGDILVGKVTPKGETELTAEERLLRAIFGEK
ARKVRDTSLRVPHGESGIVVDVKVFSRENGDELAPGVNELVRVYIAQKRKISVGDKMAGR
HGNKGVISRILPEEDMPFLPDGTPIEIVLNPLGVPSRMNLGQILETHLGRAARALGITVA
TPVFDGATEEEIKEAFRKAGLPEDGKTILYDGRTGEPFDRPITVGYMYMLKLAHLVDDKI
HARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVK
TYEAIVKGENVPEPGVPESFKVLIKELQSLGLDVKVLSEENEEIEIKEDDDDVSESAQEL
GLDVHGQPNTAPESEGGNEEDKEAEADEDFDPADLDPSELELDADLNDDLVVPDEAYGDE
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
ttggcttatccagtcaaggttggggccagggaacggtggacctttgccaagatcaaagag
accctggagttaccaaaccttattgaaatccagcgtaactcctatcagtggtttattgat
actggactgcgggagctctttcacgatatctcgcctattcaggacttcaccggcaacctg
attctgcaatttgtagattattccctgggcgagcccaagtattcagaggacgaatgcaaa
gagcgggatatgacctacgctgcccccctgcgggtcaaggtacgcttgattaacagagaa
accggcgaggttaaggaacaggaggtcttcatgggggatttccccctgatgaccgataag
ggcacctttatcatcaatggcgccgagagggttattgtcagccaactggtccgttcgccg
ggtgcctattatgctgaaggtattgatgccagcggaaccaaggtttacggagccacggtg
atccccaaccggggcgcctggctggagtttgaaaccgataatacggagagcatttatgtc
cgcattgatcgtacccgtaaaataccggtaacaatcctcctccgtgccctgggctacaac
accaatgcccgaattcttgagctttttgattacgacggccgtatccagaacaccctggaa
aaggataacacggaatctgaagaagaggccctggttgaaatctataaacgcctgcggcca
ggtgaaccgccgacggtggacagcgccagaaacttgctggaatccctcttctttgacccc
agacgttatgatctgggcaatgtcggccgctataagctccacaagaaatttaatcacggc
atcctgacccgggaggttgacggtcgggaagagtacatccgcaccttaaccaaagaggac
attatctataccatcaaatatctccttcgcctcatggatggcgaggtaaaacccgatgat
atcgaccacctgggtaaccggcgcctgcgttcggtcggagaactcttacagaaccagttt
cgtatcggtctggcgcggatggaacgagtggtacgcgaacggatgaccatccaggatgtt
gacgttatcacaccccaggttttaatcaacattcgcccggtagtggcggccattaaagag
ttttttgggtccagccagctctcccaattcatggatcagactaaccccctggcggaattg
acccacaaacgacggctgtcggccctgggaccggggggtctttcccgggaacgggccggt
ttcgaggtccgggacgtccatacctcccactatgggcgcatgtgtcccattgagacccct
gaagggccaaatatcgggctaatcggctctcttagtacctatgcccggatcaacgaattc
ggttttattgagaccccttaccggcgggtagacaaggaaaaggggattgttaccaatcag
gttgattacctgactgccgatgaagaggacaagtatttcatagctcaggccaatgccccc
ctggatgaagagggccacttcctggagaaaagggtcaatgcccgccatggcggtgaaatc
ctggtggtcccggccagccaggtggattacatggacgtctcgcccaagcagatggtcagt
gtagctacggccctgatccccttcctggaacatgatgatgccaaccgggccctgatgggg
gctaacatgcagcgccaggccgtccccctcctgagaacagaagcacctatagtggggacg
gggatggaatggcgggcagcacgcgattccggcactgtagttttagcccggaataacggc
gtggtagaaagggtcactgcccgcgagattgtcatccgtaccgacaacggccatttggaa
acctaccgcctgcagaagtttgttcattccaaccagggcacctgcatcaaccagaaacca
attgtccgcaagggtgagcgggtcagtgccggccagaccattgccgacggtccttccact
gaccagggcgaactggccctgggccgcaacatcctggttgccttcatgacgtgggagggc
tataactatgaagacgccatcctgatcagcgagaaactggtcaaagacgatatcttcact
tccattcatattgaagagtacgaatgcgacgcccgtgacaccaagctgggaccggaagaa
atcacccgggacattcccaatgtgagcgaggatgttttaaaggacctggatgagcggggc
attatccgcattggcgccgaagtgcggccgggagacatcctggtcggcaaggttaccccc
aagggcgaaacggagctgacggccgaggaacgcctcttgcgggcgatcttcggcgagaag
gccaggaaggtaagggatacttccctgcgggtcccccacggagaatccggtattgtcgtt
gacgtcaaggtattctcccgggaaaatggggacgaactcgcaccaggagtcaatgaactg
gtgcgggtctacatcgcccagaaacgcaagatatccgtgggcgacaagatggccggccgt
cacggcaacaagggagttatttcgcgcatcctgccggaagaggatatgcccttcctcccc
gatggtacgcccatcgagattgtcctgaaccccctgggtgtgccctcacgtatgaacctg
ggccagatcctggagacccacctgggccgggcagcccgggctctggggattaccgtggcc
acccccgttttcgacggggcgacggaagaggagatcaaagaagcgttccgtaaggccggc
ctgcccgaagacggcaaaaccatcctctatgacggtcgcaccggggaaccatttgaccgg
cccattacagtgggatatatgtatatgctcaagctcgcccacctggttgatgataagatt
cacgcccggtccaccggtccttactccctggtcacccagcaacccctgggcggcaaggcc
cagttcggtggccagcgcttcggcgaaatggaagtctgggctctggaggcctatggcgct
gcctataccctccaggagattttaactgtgaagtccgatgacgtcgtcggccgggtcaag
acctacgaagccattgtcaagggcgaaaacgtacccgagccgggagtcccggaatccttc
aaggtcctgatcaaggaactccagagcctgggcctggacgtcaaggtcctctccgaggaa
aacgaagaaatcgagattaaagaggacgatgacgatgtgtccgaatccgcccaggaactg
ggactggatgtccatggccagccgaatacggcgcctgagtccgaaggcgggaatgaggaa
gataaagaggcggaggcggacgaagattttgatccggccgacctggatccctcggaactg
gaactcgatgccgacttgaatgatgacctggtagtacctgacgaggcctatggcgacgaa
gaataa
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