KEGG   Methanosarcina thermophila TM-1: MSTHT_0020
Entry
MSTHT_0020        CDS       T03892                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mthr  Methanosarcina thermophila TM-1
Pathway
mthr03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHT_0020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthr03032]
    MSTHT_0020
DNA replication proteins [BR:mthr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSTHT_0020
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 RuvB_N AAA_lid_RFC1 AAA_22 AAA_14 AAA_assoc_2 AAA_6 nSTAND3 IstB_IS21 AAA_16 IPT AAA_30 DNAX_ATPase_lid DUF815 AAA_33 AAA_5 AAA_28 NACHT nSTAND_NTPase5 TsaE AAA_7 AAA_18 RNA_helicase PPV_E1_C UBA_Rad5 RsgA_GTPase AAA_25
Other DBs
NCBI-ProteinID: AKB11778
UniProt: A0A0E3KXV1
LinkDB
Position
19762..21666
AA seq 634 aa
MTLAIEWAEKYRPQTLKEIVGNKKAVQDLRTWAEKWLSGIPEKRAVILLGPAGVGKTSTA
HALARDMGWEVIELNASDQRTAGVIEKVAGSAASMNTLFGGKRLIILDEADNLHGTADRG
GMRAIAGIIKNTLQPIVLIVNDVYGLTPTIRNLCQEIKFGSVQSRSMIPALKKICESEKI
LCSPDAIQQIAENAGGDLRSAINDLQAAASGREVLEVEDISTSSRDVKENIFKVMQRIFK
STDCKKALEATYGLDESPEDLIHWIDENLPAQYASKDGDLGDIRTGFGYLSRADLYLGRV
KKRQNYGMWRYASMLMVCGAAISKTKPYPGFIKYQSPSLWRKMGQIRSRRDLRDNIASKI
GEHSFESMRYSRDNLLELYSRMLKEEESAVEITAALGLELEELIYLSGSTKASKKLQKIY
DRAQELLLEGKGQSDDVEFWNPSPSIESKEMPSGCAFNTAEEKTGKYSEKSDESDSKTAR
GGQKTLNFGVAISPETSLEITNSRNKNSDANIPYSFTSDTLLPDSLTSDSLNQEKSQEEV
GEIGFISNSFKSDNPKLDNLRSASSLPEFFESETFPAPESIESVTSPELSKPKEPVNCKP
VIKNAPDKPENPEAETSEAPKKTGSKTQKTLFDF
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgacactggcgattgaatgggctgaaaaataccgcccccagaccctgaaggagatcgtg
gggaacaagaaggcggtgcaggatttgcgaacctgggctgagaagtggctttcaggcatt
cccgagaaaagagcagtgatccttctgggacctgcaggggtagggaaaacctctactgcc
catgcccttgcccgcgatatgggttgggaagtaattgagctcaatgcaagcgaccagaga
actgcaggggttatcgagaaagttgcgggatcggcagcttcaatgaataccctctttgga
ggaaaacgcctgataattctggatgaagcggacaaccttcacgggactgctgaccggggt
ggaatgcgggctattgcagggattataaagaatacgctgcagcctatagtgctgattgta
aacgatgtttatggactgactcctactatccggaacctctgtcaggaaataaagtttgga
tcagtacagagccgttctatgattcctgctttgaagaagatctgtgagagcgaaaaaatt
ttatgtagtccggacgcaatccagcaaattgctgaaaatgcaggaggcgacctcagaagt
gcaatcaatgaccttcaggctgcagcaagtggaagggaagtgctggaagtcgaggatatc
agcacttcaagcagggatgtcaaagaaaacatcttcaaggtaatgcagagaatatttaag
agcacagactgtaaaaaagccctggaagctacttacgggcttgatgagagccctgaagac
cttatacactggattgatgaaaacctgcctgcccaatatgcttctaaggacggggatctg
ggagatataagaaccggtttcgggtatctttccagggctgatctttaccttgggcgcgta
aaaaaacgccagaactacggcatgtggagatatgcaagcatgctgatggtctgcggagct
gcaatctcaaagacaaaaccctatcccggatttatcaagtatcaatctccttctctgtgg
agaaagatggggcagatacgatcgagacgagatctaagggacaatatagcttctaaaatt
ggagaacacagcttcgagtccatgcgttattcccgagacaacctgcttgagctttactct
cgcatgttaaaggaagaagaatctgcagttgagattactgcagccctggggcttgagctt
gaggaattaatatatctctcggggagcacaaaagccagcaaaaagctacagaaaatttac
gacagagcgcaggaactccttcttgaaggaaaagggcaatccgatgacgtggagttttgg
aatccttctccttcaatcgagagtaaagagatgccttctggctgtgcatttaataccgct
gaggagaaaaccgggaagtattctgaaaaatctgatgaatccgattcaaaaactgcccgg
ggtggacaaaaaacccttaattttggcgtcgctatttcgccggaaacctccctggaaata
acaaattcgagaaataagaattctgatgccaatattccttatagttttacttcagacaca
cttttacctgacagtttgacttcagattctctaaatcaggagaagtctcaggaagaggtt
ggtgaaatcgggtttatatctaacagttttaagtcagacaaccctaagctagataatctt
cggagtgcttcctccctgcctgagttctttgagagtgaaaccttccctgctcctgaaagt
atagaaagcgttacctctcctgaactctcaaagccgaaggaacctgtgaactgtaagccc
gttatcaaaaacgctcctgacaaacctgaaaatcctgaggcagagaccagtgaagctcct
aagaaaaccgggtcgaaaacgcaaaaaacgcttttcgacttctaa

DBGET integrated database retrieval system