Methanosarcina thermophila TM-1: MSTHT_0022
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Entry
MSTHT_0022 CDS
T03892
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSTHT_0022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthr03019
]
MSTHT_0022
03009 Ribosome biogenesis [BR:
mthr03009
]
MSTHT_0022
04131 Membrane trafficking [BR:
mthr04131
]
MSTHT_0022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthr04147
]
MSTHT_0022
Messenger RNA biogenesis [BR:
mthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSTHT_0022
Ribosome biogenesis [BR:
mthr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSTHT_0022
Membrane trafficking [BR:
mthr04131
]
SNARE
SNARE associated proteins
Others
MSTHT_0022
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSTHT_0022
Exosome [BR:
mthr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSTHT_0022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
TIP49
AAA_22
CDC48_2
AAA_33
NPHP3_N
IstB_IS21
nSTAND3
ABC_tran
Mg_chelatase
Parvo_NS1
AAA_28
NACHT
Sigma54_activat
RNA_helicase
AAA_24
AAA_7
AAA_18
Vps4_C
NB-ARC
Zeta_toxin
AAA_lid_PRS2_C
TsaE
ATPase
AAA_17
PhoH
AAA_3
AAA_11
AAA_25
ORC-CDC6-like
SLFN-g3_helicase
ResIII
Sigma54_activ_2
DUF815
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKB11780
UniProt:
A0A0E3N766
LinkDB
All DBs
Position
24793..27087
Genome browser
AA seq
764 aa
AA seq
DB search
MTDKDKTTVKLKVAEADQRDVGKGIVRIDESFREKLGLKPFDVVEIRGGKSTSALIGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVEIRKADWKEAKNVTLAPVAKGIQIYAPSETLKA
IFMNRTVSKGDFISTTSLRKSRERETLGKGVMFEDFFQDFFGQGFGPSFGLGEIKLQVVS
TSPSGIVKITDLTQVELLPEATEVTPEQNIPSVMYEDLGGVKEAIGKVREMIELPLKHPE
LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFEDAERNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEALDVALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLADDVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPAEILDSLQVTREDFENALKDVQPSAIREIL
IEVPTVSWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGI
STGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPIPD
EGARREIFKVHTGKMSLAEDVDIEKLVSMTDQYTGADIAAVCKKAGRLALREDLHAKNIK
QRHFLKAIAETGPSVTPDTMKYYEAIKGELRKKKSKEIENPSYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgactgataaggataaaacaacagtaaaattgaaagttgcggaagccgatcaacgagat
gtcggaaagggcattgtccggatagatgaaagcttccgggaaaaattaggtctcaagccc
ttcgatgttgtggaaatcagaggagggaaatctacttctgcactgataggtcgtccgtat
cctagtgattctggtcttgatatcatacgtatggatgggctcatccgcaccaatgcaaaa
accagtataggagaatatgtggagattcgcaaagccgactggaaagaagcaaaaaatgta
actctagcgcctgttgccaaaggtattcaaatctatgctcccagcgaaactcttaaagct
atattcatgaatcgtacggtttcaaagggggattttatttcaaccacaagcttaaggaaa
tcgagagagagggagaccctgggtaaaggagtgatgttcgaggattttttccaggatttc
tttggccagggttttggtccatctttcgggctcggagaaataaaactgcaggtagtttct
acttctccatcaggaatagtaaagattacagacttaacacaagtagagcttttgcctgaa
gcgactgaagtaacccctgagcagaatattccttctgttatgtatgaagatttgggtggg
gtcaaagaagctattgggaaagtcagagaaatgatagagctgcctttgaaacaccctgaa
ctttttgacaggctcgggatcgatgccccaaaaggagtattgctccacggcccgcccggc
acaggcaaaacaatgcttgcaaaagcagtagccaatgagtcagatgcctacttcatctct
attaacggtccagagattatgtcaaaatactacggtgaatccgaaagggcgataagggag
attttcgaggatgcagaaaggaatgctcctgcgattatttttcttgatgagatcgattcc
attgcccctaagagagccgaagtaaccggagaagtcgagagaagagtagttgctcaactt
ctctccctgatggatgggcttaaagctcgaaaaaatgtaattgtcatagggtctactaac
cgtcctgaagctctggatgtagcacttcgccgtccaggaaggtttgaccgggaaattgaa
ctgagagtcccagatactgatggaagattggagattttccagatccacacaaggggcatg
cctcttgcagatgatgtaaacctcatggattttgctcaaataacgtatgggtttgttgga
gctgacattgcagccctgtgcagagaagcagccatgagttctttgaggcggattctgccg
aaaatcaatcttaatgaacctgaaatcccggctgaaatcttggattctctgcaggtaaca
agggaagattttgaaaatgctcttaaggatgtccagccatcggcaataagggaaatcctc
attgaagtacccacggtgagctgggatgacgtagggggtctggaagaagtaaaaaggcta
ctgaaagaggtagtggaatggccacttaagaatccagaatcttacagggacataggagtt
gaagctcccaaaggtgtccttctatatgggcctccaggtacgggaaagactctactcgca
aaagcaatagctcatgaatccgatgctaattttatcacagccaaaggaagcgatctcctt
tcaaaatggtatggggaatctgaaaaaaggattgctgaagtttttacacgggcaaggcag
gttgccccctcgattatttttctggatgaacttgattcgcttgcacctattcgagggatt
tctacaggggagccccaggttacggcgagaatccttaatcagttactctcggaaatggac
ggacttgaagaactcagggctgtagtggtaattggcgcgaccaatcgccctgatgtcatc
gaccctgcccttatccgtccagggcgttttgatgaactcattctcgttccaattcctgat
gagggggctcgcagggaaatatttaaagtccataccgggaaaatgtcgctcgcagaggat
gttgatatcgagaaactcgtttccatgaccgatcagtatacaggtgccgatattgcagct
gtgtgcaagaaggcaggaaggcttgctttgcgcgaggatcttcatgcaaaaaatatcaag
cagaggcacttccttaaagcaattgcagagaccggtccttccgttactcctgatactatg
aaatattacgaagctataaaaggtgaactcaggaaaaagaagtcaaaggaaatagagaac
ccttcttacatttga
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