Methanosarcina thermophila TM-1: MSTHT_0102
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Entry
MSTHT_0102 CDS
T03892
Name
(GenBank) collagen triple helix repeat domain protein
Organism
mthr
Methanosarcina thermophila TM-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
YNCE
Lactonase
Cytochrom_D1
Beta-prop_EML_2
SGL
InlK_D3
YqgU
DUF2322
Motif
Other DBs
NCBI-ProteinID:
AKB11860
UniProt:
A0A0E3KXW7
LinkDB
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Position
132058..134502
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AA seq
814 aa
AA seq
DB search
MNINKRSYSIALASIILFFLFSILFPTVASAAQIIKIGNGTDPAVHGNKVVWTDNGVIHV
YDLTARTDTAVDSSAASHPAIYGNKIVWHDMSSGTPKLAIYDIPTATKDYITQNVDQYSK
PAIYGDRIVWSADYNETSYNYNVYMWDMSTSTLTKIAEGNSPDIYETKIAYGYDGDYGRN
IVVYDVNTKETINVHYSDQVFNPHIYGNKVMWSDFFNRDGYIQMYDLETKEIIDVTSDHT
GNTLYGSDYADAGADTGTHPNIHGDKIVYSKSGDDQFGYAGVYIYDIPSAKSTPVYIYPK
GTHTTPDIYNNTIVWGIDSNYGAINDTGIYIYDLSVTNTLPPVAEFAANTTYGAAPLVVL
FIDTSTGGVPTSWIWDFGDEIYSKHAMNATHTFTKPGNYTISLTVGNEAGNSKVMKPNYI
VVTNPFPVANFSINATHGYPPLSIQFTDLSQNATGWCWDFGDGNNSTQRNPVHEYTDPGI
YSVNLTASNENGTDSKLTTITVMQPFGVGPFAYIANSGDNTVSVIDTATNNVTAIIPVGN
YTMGVAVSPDGKKVYVTNFFDSTISVIDAAKNKVTATIPVGNAPRGVAISPDGKKVYVPH
TDVGAPSNNMIFIIDTATNEVEATVLVGVVPFGVAVTPDGKKVYVTNLDDKTVSVIDTAT
NTVIATIPVGNNPRGVAISPDGKKVYVACDEGSNNGYIYVIDAVKNKVTARVPVGEFPSE
VAVTLDGKSVYVTNGLSNTISVIDATKNKVTATIPVGNSPSGVAVTPDGSWVYVTNYASN
NVSVIDTSTNKVTATMNVGRSPNSFGQFIGSLQA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattaacaaaagatcatattcgatagctttagcctcaataatcttattttttctg
ttttctattttatttccaaccgtagcgtcagcggcgcagataataaaaattggcaatggg
actgatcctgccgttcatgggaacaaagtggtatggacagacaacggtgttattcatgtt
tatgacctgaccgccagaacagacactgcagttgactcttctgcagcatctcatccagct
atctatggaaataaaatagtgtggcatgatatgagtagcgggacaccaaagcttgcgata
tacgatattcctacagctacaaaagattacataactcagaatgtagaccaatatagcaaa
cctgctatttacggcgacagaatcgtgtggagtgcggattacaacgagacaagctacaat
tataatgtatacatgtgggatatgtcaacttctacactgactaaaattgcggagggcaat
agtcctgatatatacgagaccaagatagcgtatggttatgatggtgactatgggcgaaac
attgttgtttatgatgttaatactaaggagaccataaatgtacattattccgatcaggta
ttcaatccgcatatatatggtaataaagtgatgtggtcagacttctttaacagagatgga
tacatccagatgtatgaccttgagactaaagaaattatagacgttaccagtgaccataca
ggtaatactttatacggatctgattatgctgatgctggagctgacactggcacccacccc
aatatccatggtgacaaaatcgtatattcaaaatccggtgatgaccagtttggttatgcg
ggtgtatatatttatgacattccttctgcaaaaagcactccggtctatatttatccaaaa
gggactcacacaacacctgatatttacaataatacgattgtgtgggggatagacagtaac
tatggtgcaattaatgatactggcatctatatctatgatctttctgtcacaaacaccttg
ccacctgtagctgaatttgctgcaaacacaacctatggagctgcacctctagtagtgtta
ttcatcgataccagcactggcggagtaccgacctcttggatttgggattttggggacgag
atttactcaaaacatgctatgaatgcaacccacacgtttacaaaaccagggaactataca
atcagtctgactgtgggaaatgaagcaggtaatagtaaagtaatgaaaccaaattacatt
gtcgttactaatccatttccagttgcaaacttcagtatcaacgctacccatggttatcct
cctctctcaattcagtttactgacctttcacaaaatgcaactggatggtgctgggatttc
ggagatgggaataattctacacaaaggaacccagttcatgaatacacagatccaggaatc
tattcagttaatctgacagcaagcaacgaaaatggtacagattcaaagttaactacaata
acagtaatgcagccattcggtgtaggtccatttgcttatattgcgaactccggcgacaat
actgtatcagtaattgacacggctactaataacgttacagccataattcctgtaggaaac
tataccatgggagttgcagtcagcccggatggaaaaaaggtatatgtgactaactttttc
gacagtactatatctgtaattgacgcagcaaaaaataaagttacagccacaattcctgta
ggaaacgctcctcgcggagttgcaataagtccggatgggaaaaaagtatatgttccacat
accgatgtgggagctcccagcaacaatatgatttttattatagacacggctaccaacgag
gttgaagccacagtgcttgtaggcgtagttccttttggagttgcggtcacaccggatggg
aaaaaggtgtatgtgactaatctcgatgataaaactgtctcggtaattgacacggcaaca
aacactgttatagctacaattcctgtaggaaacaatcctcgtggagttgcaataagtcca
gatgggaaaaaggtatatgtagcgtgcgacgaaggaagcaataacggatatatctatgta
attgacgcagtaaaaaacaaggttacagccagagtacctgtaggggaatttccttctgaa
gtcgctgtcacactggatggaaagagtgtatatgtgactaatggtcttagtaacactata
tctgtaattgatgcaacaaaaaacaaagttacagccacaattcctgtaggaaatagtccg
agtggagttgctgttacaccggatggatcatgggtatatgttactaactacgccagcaat
aatgtttctgtaattgacacatcaacaaacaaggttacagcaactatgaatgtaggacgt
agtcctaattcctttgggcagttcataggttctctccaagcgtaa
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