Methanosarcina thermophila TM-1: MSTHT_0277
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Entry
MSTHT_0277 CDS
T03892
Name
(GenBank) DNA helicase related protein
Organism
mthr
Methanosarcina thermophila TM-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_12
AAA_11
DUF3320
AAA_30
AAA_19
SLFN-g3_helicase
ResIII
DEAD
UvrD-helicase
Helicase_RecD
AAA_16
IstB_IS21
DUF559
AAA_22
nSTAND3
NPHP3_N
GvpD_P-loop
RAP
Motif
Other DBs
NCBI-ProteinID:
AKB12035
UniProt:
A0A0E3KY09
LinkDB
All DBs
Position
complement(335399..340759)
Genome browser
AA seq
1786 aa
AA seq
DB search
MVDVAKELEALRQNLLDLSLRNNLLNYRPSQRRTILISGRKPEEIYELFVLHEKSLRFRA
KTRSKKGRKTKTGEEDETSEKESKLLRTIRKTLISEEDRSQKEDNIRSFRSESFLETPDD
SETLDKKLFYVFNQANSIFEEQGYPVLYLALGFLQWNDSRVAVKNPKAPLLLVPVELKRV
GKSRVFSIQWTGDEIFTSITLQAKMKEFGIFLPEFEMPEEAAGIEEYFRAVSREIREKED
WKLLPEVCLDLFNFKKFVMYKDLDPATWPEDMTPADHPLIQKVFNPGDPDCEDSGFLEDE
VDLKLSAKDTYLIMDADSSQIAVIEDIKAGKNLVVEGPPGTGKSQTIANAIAELIAQGKS
VLFVSEKMAALQVVKSRLDSAGLGELCLEIHSNQTRKKAVLEELEKTLNRAAPSPIRPDR
DLNELEKLKHELNQYALSLGKPAGNLYPSLYTLYGIREKTKAYFESKNLKMPAYKFQEPE
TWEPEAWTDAKTVLEKLGQVLPFLSPIRKNPWYGCKPGLVLPSDLGEIEVLTDECAAAFE
ALETAIKTFNDLSATSKPRTLEGIETAIEAARLLGKTNPLPERMLQNLEWESETSRAGAD
ALLSSFRRYIELRTFVEKTFNPAIFDLDTSKFEELSSSLLKFLNPKYRKLRKEISACYRS
GAPLRDSKILLDLASLSEYKACRLELENSDSKGKKYFGDYWKGLESDPALLEEYSQWVIP
FRKYLKEGILTDRSFRLIAAGIDNTALESAANRVLAAKQEFLESLNKFGIRIGADFNKMF
GHSLETVKLSLLKSRIMKWKNETSSLILWSQYLGYRQACLETKAAPMIEDLESGKLDVSD
AIPAFEGNYAEILLNRAFRERPALSTFIRELHESKLEKFRELDKKVLLENQRRVICLAYE
EAPKLNSGASRASEAGILLNEFNRKRGHMPIRTLMKKAGGIIQKIKPCFLMSPLSIAQYL
DPRSTRFDVIIFDEASQVRPEDAVGALLRGKQVVVMGDSKQLPPTEFFDTVLAPESDPDD
YTAAGDMESILNVCKRSFPVKTLRWHYRSRHESLIAISNQEFYDNQLYVYPSPMQKDEKL
GLKFVHLPDAVYDRGKSGVNRLEARVVARAVLEHFSRYPDKSLGVGTFNVKQQEAIQEEI
EALLKVNPGFDLNSVNEKGEHFFVKNLETIQGDERDVIFLSVGFGFDSNRKLSLNFGPLN
REGGERRLNVLITRAREKCVVFSNFTSRDLNLEENSPFGLRALKVFLEFAESGRLPSPAC
SGETFDLPFEEAVFAFLTENGFEVHRQIGCAGYRLDLAVPDPVHSGHYVLGIECDGADYY
SLHVARDRDRLRQQVLEGLGWKIYRVWSTDWYLHPKESREKLLEAVREAVKQAKQQAKPE
AMPEIPVINEPSSWAEPLNYTPAGKFSDSPENPVFSVSALPAESNENAGSEEFETGFFDR
SSLSESFEAELLPETSFGTEVKEPYSGAYFRLEEGLTAPSSKDFLPEMTSRAESLVKVAN
ANSRKKPVRRSGKSKLLRFNANPRSDKDRTEPIPEPEPEKVSFFQAYPEIDFSSVPEKRK
KRRRLNEFAYIYGSEGYFESEPDLEDDYPENEPEKQSGKDNSLEAMVPLYQVCLSSGLPQ
SRDLSEVSDKQLEEAIIRIVACEGPIHAELLPQRIKSHTGIPRMLGKIKQRIYDAVEAAE
NSGKIRVKGEFYWPVSEPACLLRRRAGDAPAKIEWICDEEIKEAIRFVLNNQYSTPLEDL
IVQTSRVLGIKTTRKNTSGRIEKLILSGIEDSELTVLPNKMIYFAE
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgtagctaaggaattggaagcactgaggcagaatttgcttgatctgtccctt
cgaaacaatcttctcaattaccgcccttctcagagaaggacaatcttaatctcaggcaga
aagccagaagagatttatgaactttttgtccttcatgaaaagtcattgaggttcagagca
aaaaccaggtccaagaaaggaagaaaaaccaaaactggggaagaagatgagacttcggaa
aaggaaagcaaacttttgagaacaataagaaaaacccttatttccgaagaagacagatcc
cagaaagaagacaatatccggagtttccgttctgaatccttcctggaaaccccggatgac
agcgaaacccttgataagaagcttttttatgtttttaatcaagcaaattctatttttgaa
gaacagggatatcctgtgctctaccttgctctgggttttctgcagtggaacgacagcagg
gtagccgtaaaaaatcctaaagctccccttctcctggttcctgtcgaactcaaacgcgta
ggaaaaagccgtgttttcagcatccagtggacaggagacgaaatctttacttcaattact
ctccaggcaaaaatgaaggaatttggaatctttcttcccgaattcgagatgcctgaagaa
gctgcaggcattgaagaatacttcagggctgtatcccgggaaatccgcgaaaaagaagac
tggaaactcctgcctgaggtctgtcttgacctttttaatttcaaaaaatttgtaatgtat
aaggatctcgatcctgcaacctggcctgaggacatgactcctgctgaccatcccctgatt
cagaaagtttttaatcctggggatcccgattgtgaggattccggcttccttgaagatgag
gttgacctgaaactctcagcaaaagacacgtacctgataatggatgccgattcttcccag
atcgcggttattgaagacataaaagccggaaagaatcttgtcgttgagggaccgcccgga
accggcaagtcccagacaattgctaatgccattgcagagcttatagcacagggaaaaagc
gtacttttcgtgagtgaaaaaatggctgcccttcaggtggtaaagagcaggctggactcg
gctggtctgggagaactctgtcttgaaattcacagcaaccagacccggaaaaaagccgtg
cttgaagaactggagaaaaccctgaatcgtgcagccccctccccaatacgccctgacaga
gatctcaatgagctcgagaagctaaaacatgaactcaaccagtatgccctgtcccttgga
aagcctgctggaaatctctatcccagcctctataccctttatggcataagggagaaaaca
aaggcttacttcgaatcaaaaaatctgaaaatgcctgcttacaaatttcaagagcctgaa
acctgggagcctgaagcctggaccgatgcaaaaactgttctggaaaaactgggtcaggta
cttccttttctcagtcctatccggaaaaatccctggtatggctgcaaacctgggctcgta
ctgccttcagatctcggagaaatcgaagtccttacagacgaatgtgcagcagcttttgaa
gccctggaaacagccataaaaacatttaatgacctctctgcaacctcaaagcccagaact
ctcgaaggaattgaaactgcaatcgaagccgcaaggcttctggggaaaacaaaccccctg
cctgaaagaatgcttcagaatctggagtgggaatctgaaacctcaagagctggggctgac
gctctgctttcgagcttcagacggtatattgagctcaggacttttgtggagaaaaccttt
aaccctgcgatttttgatcttgatacctctaaattcgaggagctttccagcagtctcctc
aagtttttaaacccaaaatacaggaagctcaggaaagagatttcagcctgctatcgctca
ggagcacctttgcgggacagcaaaatccttcttgatcttgcttcgctttccgaatataag
gcctgcaggctggagcttgaaaattcggattcaaaaggtaaaaagtattttggagattac
tggaaaggtttagaaagcgatcctgctctccttgaggaatacagtcagtgggtaattccc
ttccggaaatacctgaaagaaggaattctgacggacagaagtttcaggcttatagcagcc
ggaattgacaatacagctcttgaatcggcagccaaccgggtgcttgctgcaaagcaggag
tttctggagtcacttaataagtttgggattcgaataggcgcggatttcaataaaatgttt
ggacatagcctggaaactgtaaaattgagcctgttaaaatcccgtataatgaaatggaaa
aacgaaacttcttccctgatactctggagccagtatctcggataccggcaggcatgtctg
gaaacaaaggcagcacctatgatagaggatcttgaatccggaaaacttgatgtctcggat
gcgattcctgcttttgaaggtaactacgccgagatcctcctgaatcgagccttcagggag
agacctgcgctctctactttcatccgtgagctgcacgaaagtaaacttgaaaagttcagg
gaacttgacaaaaaagtgcttctggaaaaccaaagaagggtaatctgtttggcttatgaa
gaagccccaaaattgaattcaggtgcttcaagggcttcggaagcaggcattttactcaat
gagttcaaccggaaaagagggcatatgcctatccgcacccttatgaagaaagcaggtggc
atcattcagaagatcaagccctgtttcctgatgagcccgctttccattgcacagtatctt
gaccccagaagcacccgttttgatgtgataatctttgacgaagcaagtcaggtcagaccc
gaagatgcagttggagctctcctgcgcggaaaacaggtagtggtaatgggagactcaaag
cagcttcctccaacagaatttttcgatactgtactcgctcctgagagtgatccagatgac
tatactgcagccggggatatggaaagcatcctgaatgtctgcaaacgcagcttcccggta
aagaccctgcgctggcactacaggagcaggcatgaatcccttatcgcgatttcaaatcag
gaattttacgataaccagctctatgtttacccttcgccaatgcaaaaagacgaaaagctc
gggctgaagttcgtgcaccttccggatgcggtttatgacaggggtaaaagcggagttaat
cggttagaagcaagagttgttgcaagggcggttctcgaacacttcagcaggtatcccgac
aaaagcctcggtgtagggacttttaatgtgaaacagcaggaagccatccaggaagaaatc
gaagccctgcttaaagtaaatccgggatttgacctgaattcggtaaatgaaaaaggagag
cacttcttcgttaagaatctcgaaactattcagggcgatgaaagggatgtcatatttctg
agtgtgggtttcggttttgatagcaaccgaaagctttctcttaatttcggtccccttaac
cgtgaagggggggaaagacgcctcaatgttcttattacacgcgccagggaaaaatgcgtt
gttttctcaaactttacatcaagggatttaaatctggaagaaaattcgcctttcgggctc
cgagccctgaaagtcttccttgagtttgctgagagcggcaggcttccctcgcccgcatgc
agtggggaaaccttcgatttgcctttcgaagaggcagtttttgctttcctgacagaaaat
ggcttcgaagtccacaggcagataggctgcgcaggttacaggctcgaccttgcagtccct
gaccctgttcattcaggacactatgtgcttggaatagagtgtgacggagcagattattat
tccctgcatgttgcacgggatcgtgatcgtctgcgccagcaggtactcgaggggcttggc
tggaagatctacagagtctggtcaacggactggtacctgcatccgaaagaaagcagggag
aaactgcttgaagctgtaagagaagctgtaaaacaggcaaagcaacaggcaaaacccgaa
gccatgcccgaaattcctgttataaacgaaccatcttcctgggctgaacccttaaattac
actcctgcaggaaagttttcggattcccctgaaaacccagtattctctgtttcggctttg
cccgcagaaagtaatgagaatgcaggtagcgaggaatttgaaaccgggttttttgaccga
agctccctttcagaatctttcgaagccgaacttcttcccgagacttcctttggaaccgaa
gttaaagagccttattcaggcgcatatttcagactggaagaagggcttactgccccttca
agtaaggactttctgccagaaatgacctcaagggcagagtcactggttaaggttgccaac
gcaaactcccgcaagaagcctgtgagaaggtcaggaaaatcaaaacttcttagatttaat
gcaaaccctcgatcggacaaagacagaactgaacccatacctgagcctgagcctgagaaa
gtaagtttcttccaggcttatcctgagatagatttcagttcagttcccgagaaaagaaag
aagcgcaggcgacttaatgagtttgcttatatctacggttcggaaggttattttgaatcc
gaacctgacttagaagatgattatccagaaaacgagcctgaaaaacagtccgggaaagat
aattcattagaagcgatggtacccctttaccaagtctgcctttcctcaggacttccgcaa
tccagagatctttctgaggtttctgataagcagcttgaggaagcaattataaggattgta
gcatgtgagggtcctattcatgcagaactcctgccgcagcggataaaatcgcatacagga
attccccgcatgctcgggaagataaaacagcgaatatatgatgctgtggaggctgccgaa
aattccgggaaaattcgagtaaaaggtgagttttactggccggtttcggaacctgcctgt
ctcctgcgcaggcgtgctggagacgcacctgcaaaaatcgaatggatctgcgacgaggaa
ataaaagaagctattcgttttgtcctgaacaaccagtattcaaccccacttgaggatctt
attgtccagacttcaagggttctcgggataaaaactacccgtaaaaatacctcgggaagg
atagagaaacttatcctttcaggaatcgaggatagcgaactgacagttctgcccaataaa
atgatctattttgcagaataa
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