Methanosarcina thermophila TM-1: MSTHT_0305
Help
Entry
MSTHT_0305 CDS
T03892
Name
(GenBank) Oligopeptide transport ATP-binding protein OppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSTHT_0305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mthr02000
]
MSTHT_0305
Transporters [BR:
mthr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSTHT_0305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_29
AAA_22
AAA_16
ATP-synt_ab
AAA_23
AAA_19
ATPase
DUF87
nSTAND3
nSTAND1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKB12063
UniProt:
A0A0E3ND32
LinkDB
All DBs
Position
complement(369521..370504)
Genome browser
AA seq
327 aa
AA seq
DB search
MLEVKGLKKIFTSGFLPRTRIKAVDDVSFHIEKGETLGIVGESGSGKSTLGQCILRLIEP
TAGKIIFNGIELTALDNKALNNIRPCMQMIFQDPDSSLDPKMTIGQSIAEPLKLKGNNRE
AVKSRVLELIRQVGLSPEHVNRFPYQLSGGQNQRAVIARALALKPVFIVADEPTASLDIS
VQAQILNLLRHLKEKYALTMLFISHDLELIKHMCDRVAVMYRGKIVETGKIEDIFHSPLH
PYTQLLLAEEADSEVNVSEIKKTLRTTCPYYQECLLRSEICLTKTPELKELKNQLVACHH
VLEKSTQQPYQDRYAGKTGVTSDQLVA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggtaaaaggccttaaaaaaatatttacttccggcttccttcccagaaccaga
atcaaagcagtggatgatgtatcctttcacatagaaaaaggggagactcttggcattgta
ggggaaagcgggagtgggaaatctactctgggacagtgtatcctcaggcttatagaacca
acagcaggaaagattatttttaatggaatagaattgaccgcgcttgataataaggcgttg
aataacatccgtccctgcatgcagatgatatttcaggaccctgactcttcccttgatccc
aaaatgacaattgggcagagcatagctgaaccactaaaacttaagggtaacaatcgggag
gcggttaaaagcagggtcttagagcttatcaggcaggttgggctgagtcccgaacatgtc
aaccgctttccctaccagctcagtggaggccagaaccagagagcagttatcgcaagagcg
cttgctcttaaacctgtttttattgttgctgatgagccaaccgcctccctggatatctcg
gtacaggcacagatattgaacctgctaagacacctgaaagaaaagtatgcccttactatg
ctgttcatctcgcacgatcttgagttgatcaaacatatgtgcgacagggtagctgtgatg
tataggggaaagattgtggaaactggaaaaatagaagacatctttcactcccctctacac
ccttacacacaattgttgctggcagaggaagctgattctgaggttaatgtcagtgaaatc
aaaaagactttgagaactacctgtccgtattatcaggaatgtctcctcaggtcagaaatc
tgcctcacaaaaactccagaattgaaagagctgaaaaatcaacttgttgcatgtcatcat
gtacttgaaaaaagtactcagcagccttatcaggacaggtacgcaggtaaaacgggtgtt
accagtgatcagcttgttgcctga
DBGET
integrated database retrieval system
