Methanosarcina thermophila TM-1: MSTHT_0313
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Entry
MSTHT_0313 CDS
T03892
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mthr
Methanosarcina thermophila TM-1
Pathway
mthr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSTHT_0313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mthr03009
]
MSTHT_0313
Ribosome biogenesis [BR:
mthr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSTHT_0313
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB12071
UniProt:
A0A0E3N7G9
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All DBs
Position
complement(377183..377875)
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGNKHFEVLVEPEGALAYKRGEDVNLEDILAVETIFEDASRGDRAAE
SDIVNAFETTDPLKIAAMILKSGELQLTADQRKRMIEEKKRKVIYTISRNAINPQTKAPH
PPARIERAMEEAKVHIDPLKSVDQLVNITMKAIRPLIPIRFEEINIAVKIPPEYAPKAYG
EISRIGSITKEEWQPDGSWIAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcacggctcaagagaggcaacaaacacttcgag
gtcctggtcgagcccgaaggggctctggcctacaaacgaggagaggacgtaaaccttgaa
gatatcctggcggttgaaactatcttcgaagacgcaagccgaggggatcgagcagcagag
tccgatattgtcaatgcttttgagacgaccgaccctttaaagattgctgccatgattctg
aaaagtggggagcttcagctcactgctgatcagagaaaacgcatgatcgaagaaaaaaag
agaaaagttatctataccatttccagaaatgctataaacccccaaacaaaagcaccgcac
ccccccgctcggatcgaaagagcgatggaagaagcaaaggtgcatatagaccccttaaaa
agcgtggatcagctggtcaatattacaatgaaagccattcgcccgcttatacctatacgc
tttgaggagatcaatattgctgtgaaaatccctcccgagtatgctcccaaagcatacgga
gagatttccagaatcggaagtattacaaaagaagaatggcagcctgatggctcttggatt
gcagttgtaagaatccctgcaggagtccagactgatttttacgctcttataaatcatctt
acaaagggagaggctcaaactaaacttttataa
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