Methanosarcina thermophila TM-1: MSTHT_0559
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Entry
MSTHT_0559 CDS
T03892
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthr03032
]
MSTHT_0559
03400 DNA repair and recombination proteins [BR:
mthr03400
]
MSTHT_0559
Enzymes [BR:
mthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSTHT_0559
DNA replication proteins [BR:
mthr03032
]
Prokaryotic type
DNA Topoisomerases
MSTHT_0559
DNA repair and recombination proteins [BR:
mthr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSTHT_0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
IMS_HHH_1
TfoX_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AKB12317
UniProt:
A0A0E3NAG3
LinkDB
All DBs
Position
692991..695285
Genome browser
AA seq
764 aa
AA seq
DB search
MHLIVTEKNIAAKRIAAILAPKNPKKDRVSGVDVYRYETVSSDGKKQETAVIGLSGHIVG
IDFPKEYNNWQKVDAKALIDAEIVTTPINRKIVTALRSLGKKASRVTIATDYDREGELIG
VEALNIIKKVNPDVPFDRVRYSAITPKAIEVAFSNPTNVDFNLADAGHSRQVIDLVWGAA
LTRYISLAAGRLGKMFLSVGRVQSPTLSLIVDREKERNIFVPTPYWEIHVELQNAKGETF
SAQHSTRRFLDKKEAEKVFKKLGKQAKLKEIEKGKKTDQPPIPFNTTGFISAANSIGLSP
ANAMRIAESLYTNGYISYPRTDNTVYPDTLDLKAQIEIFREGPFKEYANALLEKAELSPT
RGKKETTDHPPIFPVSLAKKTDLKEDEWKVYELVVRRFFATFAGPSEWETMRLKLDIQGE
EFRANGARLVEPGWRWYYPYNAPEDRLLPELREGDSLEVIKKEILDKETQPPGRYGQGKL
INIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVVDTLEKYSPAITKPDMTR
QLEENMDLIAEGKIKEAEVLEESRKMLKQVFSELDKNRDKIVESLQAGLREDKIIGICSG
CGNELMIRRSKRGGRFIGCSNYPNCTFSLPLPKSGQIVVIDKMCETHGLHHIRIINSGKR
PWDLGCPQCNFIEWQKIQEEEQAQQPKKERPKSIQDLEGVGKATAGKLEEAGITSVEALA
EADPVELARTIKTSVKKVKNWQVSCNGTVKDTGTVEDSSAIEDA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttatcgtaacggaaaaaaatatagcagcaaagaggattgctgcgattctggct
ccaaagaatccgaaaaaggatagagtcagcggagtggacgtgtaccggtacgagaccgtg
tcctccgatgggaaaaagcaggagactgctgttataggattgtcgggccatattgtaggg
atagattttcccaaggagtacaataactggcagaaggtcgatgctaaagcccttattgat
gccgagatcgtaacaactcctattaaccggaagattgtaactgccctgagaagcctggga
aaaaaggcaagcagggttacaattgccactgactacgaccgagaaggcgaactgatagga
gttgaagcactcaatattataaaaaaggtaaatccagatgttccttttgaccgggtccgc
tacagtgcaataaccccaaaagcaatagaagttgctttttcaaacccgacaaatgtagat
ttcaatctcgcggatgcaggccattcaaggcaggtcatagaccttgtatggggtgcagct
ctcacccgctacatttctcttgctgcaggcaggcttgggaaaatgtttctctcggtaggc
agagtacagtcgcctacgctttctcttattgttgacagggaaaaagaaaggaatattttt
gtcccgactccttactgggagatccatgtcgaacttcaaaatgctaaaggagagactttt
tcagctcagcactcaacccgccgcttcttggataaaaaggaggcagaaaaggtcttcaag
aaactgggaaaacaggcgaagttaaaagaaattgagaaagggaaaaagacggatcagccg
ccgattcctttcaatacaacaggtttcataagcgcagctaattcaatcgggcttagtccc
gcaaatgcgatgcgcatagccgaatccctttacactaacggttatatctcatacccgaga
actgacaatacggtttatcctgatacccttgacctgaaagcccagattgagattttcagg
gagggtccttttaaagaatacgcaaacgccctgcttgagaaagccgaactttcccccacg
cgaggcaaaaaagagactactgaccatccaccgatttttccggtttcccttgcaaaaaag
accgacttaaaagaggatgaatggaaggtttatgagcttgtagtcaggcggttttttgca
actttcgccggaccgagcgaatgggaaaccatgcgtttgaaacttgatattcagggggag
gaattcagagcaaacggagcaaggcttgtagagccgggctggagatggtactatccttac
aatgcgcctgaagacaggctcttacccgaactccgcgaaggcgattccctggaagttata
aagaaagagatactggacaaagaaacccagcctccgggccgctacgggcagggaaagctt
atcaatattatggaggagctggggcttgggacaaaagccaccaggcacgagataatcagc
aagctttattccagagcttacattcacggaaatccggtacagcccacgaatacatctttt
gcagtagtggatacccttgagaaatattctcctgccatcacaaagccggacatgacaagg
cagcttgaagaaaacatggacctgattgctgagggcaagatcaaagaggctgaggtgctt
gaggaatcgcggaagatgttaaagcaggtcttctcagaacttgacaaaaaccgggacaaa
atcgtggaatccctccaggcaggcctcagggaagacaagattataggcatctgctcaggc
tgtggaaacgaacttatgatccggcgttcaaaaagaggaggccgttttataggctgcagc
aactatccaaactgtaccttttccctccccctgccaaaaagcggacagatcgtggtcatt
gacaaaatgtgtgaaacccacggcttgcaccatatccgcataatcaattcaggtaaacgt
ccctgggatctcggctgcccacagtgcaatttcatagaatggcagaaaatccaagaggaa
gagcaggctcagcagccgaaaaaagagcgcccgaaatcaatccaggatctcgaaggtgtg
ggaaaagccacagccgggaaactggaagaagccggaattacaagcgtggaagccctggca
gaagccgatcctgtagaacttgcaagaacaatcaagaccagcgtaaaaaaggttaaaaac
tggcaggtttcatgtaacggcacagttaaagacaccggcactgttgaggacagcagcgca
attgaagacgcgtga
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