Methanosarcina thermophila TM-1: MSTHT_0642
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Entry
MSTHT_0642 CDS
T03892
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mthr02000
]
MSTHT_0642
Transporters [BR:
mthr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSTHT_0642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_membrane
AAA_15
SMC_N
TsaE
AAA_23
DUF5941
AAA_29
DotY
AAA_22
AAA_25
DLIC
DUF3584
nSTAND3
AAA_7
Zeta_toxin
NACHT
RsgA_GTPase
Septin
AAA_5
SRP54
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKB12400
UniProt:
A0A0E3KP18
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All DBs
Position
805436..807247
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AA seq
603 aa
AA seq
DB search
MTESARKMRIDILNFKRALSLVWQSAPGWTLISAFLIVLQGALPLASLYLMKLIVDSVTT
GISSSNKEAAFGHIVLLIFLAAAAAFFTVLNSAVLSIVSEAQAALVSDNILDLLHDKSIE
ADLEYYENPKYYDTLYRAQNDAPFRPTRIVNSIFQVCQNGISLVIVFGLIASFSWIVAAS
LTIAAIPVAFVRLIYSNRIYEWQCSCTAKERKVWYFHWLLTSNSSVKEIKLFNLGPLFTK
RYHNLRKKLRKERLTITAKQSVADLATQTVSIATIFVSFIFIAMRAFQGNITLGDLVMYF
GALQQGYSFLSNFLNGFADLYEDNLFMTTLYKFLDLKPALKESSNTIPVPEKIKDGIFFE
HVGFSYPNQKTRVLKDINLHISAGKTIALVGDNGSGKTTLIKLLCRFYDPTEGRILIDGI
DIRNFKILDLRKEISIVFQDYIHYNLTARENIWFGDVNKPVDEKNILQAAACSGANRIIE
QLDNGYETILGKWLEDGTELSIGEWQKIAIARAFFRDSQIIVLDEPTSSLDPKAEDEVFK
KFKQIAAGRTAIIISHRLSTVKMADSIYFMKEGRILESGTHDELMALDGEYAQLFRIQSK
HYN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatctgcaagaaaaatgagaattgatattctcaactttaaacgtgcactttcg
cttgtctggcaaagcgcacctggatggacgctaataagtgcctttttaatagtgctgcaa
ggtgctctgccattggcttctctttatcttatgaaattgatagtggactctgtaacgact
ggtatctcctcatcaaataaagaggctgccttcggacatatcgtgctccttatcttccta
gcagctgcggcagcatttttcactgtcctgaacagtgcagttttaagtatagttagtgaa
gcacaggcagctttggtttcagacaatatccttgatttacttcatgataaatcaattgag
gctgacctagaatattatgagaatcctaagtattacgatacactctatagagctcaaaat
gatgctcctttcaggccaacaagaatagttaacagcattttccaggtatgccaaaatggt
atatccttagtgattgtattcgggttgattgcttcttttagctggattgtagctgcatct
ctaacaattgcagccataccagtagcctttgttcgtttgatatactcaaacagaatttat
gaatggcaatgttcttgcacggcaaaggaacgaaaagtatggtattttcactggctgctt
accagtaatagtagtgtaaaggaaatcaaactgtttaatcttgggcctttgttcacgaaa
aggtaccataacttacgtaagaagcttcgaaaggaacgattaaccataacagctaaacaa
tctgtagcagacctagctacccaaaccgttagtattgcaactatttttgtaagtttcata
tttatcgctatgagagcttttcagggaaatataacccttggtgacctggtaatgtacttt
ggagctttacaacagggctattcatttctttctaatttcctaaatggttttgcagatctt
tacgaggacaacctctttatgacaacgctttataaatttttagatctaaagcctgctttg
aaagaatcatcaaatacaataccagtgcctgaaaagattaaagatgggatcttcttcgaa
catgttggatttagctatcctaaccaaaaaaccagagtcctgaaagacatcaacctgcac
ataagtgctggaaagaccatagctcttgttggagacaatggatcgggcaaaactacactg
ataaaacttctttgcagattctatgatccgactgaaggaaggatactgattgacggaatc
gacatccgcaatttcaaaatactagatttacgaaaagaaattagtatcgtctttcaggat
tatatacattacaatttaactgctagagaaaatatttggttcggtgatgtaaataagcct
gttgacgaaaaaaatatcctgcaagcagcggcgtgttcaggagcaaatcgtattattgaa
cagcttgataatggctacgagactatcctgggaaagtggcttgaggatggcacagaattg
agtattggggaatggcagaaaatagctattgccagggcttttttccgggattcccagata
atagttctggacgagcctacaagctcattagatccgaaggctgaagacgaagttttcaaa
aaatttaagcaaattgctgcaggtcgaactgctataataataagtcacagactctcaaca
gtgaaaatggcggattccatatatttcatgaaagagggaaggatcctggaaagtggtact
catgatgaattgatggctcttgatggtgagtatgcacaactttttaggattcaatcaaaa
cattataactaa
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