KEGG   Methanosarcina thermophila TM-1: MSTHT_1002
Entry
MSTHT_1002        CDS       T03892                                 
Name
(GenBank) DNA-directed RNA polymerase subunit A''
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
mthr  Methanosarcina thermophila TM-1
Pathway
mthr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MSTHT_1002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mthr03021]
    MSTHT_1002
Enzymes [BR:mthr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MSTHT_1002
Transcription machinery [BR:mthr03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     MSTHT_1002
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 CBP66 SpoIIP ParB_dimer DUF4367
Other DBs
NCBI-ProteinID: AKB12760
UniProt: A0A0E3KYM3
LinkDB
Position
1251798..1252976
AA seq 392 aa
MSISEATIDSMIKDLPLPSNILNTLREDAIKAGVSKKEMEEIIERLMEEYQASCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
HPDDYAYNREKTRALAWEIEATKVDHIADVTTDLSQMQLIIDLHEKAMESRNITIDQVKE
KLSDELNAKVTISPDIDNQIIIAPGEPSYRELLQLAKSIHNVTLKGVEGIKRVVVRKEGE
EYTLYTEGSALREVLQFEGVDKTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGLT
VDIRHIMLVADLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQ
GVTENIIVGQPIRMGTGDVHLISRRKSEVEAE
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgagtatcagtgaagctacaatcgatagcatgataaaagatctgcctcttccttcaaat
atccttaatacgcttagggaagacgccattaaagcgggtgtaagcaagaaggaaatggaa
gagattatagaaaggttgatggaagagtatcaggcctcatgcattgagccctgtgatgct
gccggtgtggttgcagcccagtctataggagagccgggtacccagatgacgatgcgtacc
ttccactatgctggtgtcgccgagattaacgttactctcggtctgccccgtcttatcgaa
atcgtggacgcaaggaaaattccgagtactcctatgatgacaattgccctttccaaagaa
catccagatgactatgcttacaacagggagaaaacaagagctcttgcctgggaaattgaa
gcgaccaaggtagatcacattgctgatgtgacaaccgatctttcccagatgcagctgata
atagacctgcatgaaaaagcaatggaaagcaggaacattactatagaccaggtaaaggaa
aagttaagcgatgaactgaatgcgaaggttaccatttccccggatatagacaaccagatt
attattgcccctggagagccttcttacagggaacttctccagcttgcaaagagcatccac
aacgtcactctgaaaggcgttgaaggaatcaagcgcgtagtggttcgtaaggaaggggaa
gaatataccctctataccgaaggctcggccctgcgtgaagttcttcagtttgaaggtgta
gataaaacaaggacaagcacgaataatatcaatgagatctatgaagtgcttgggatagaa
gctgcaagaaatgcgattattaaggaagcaaccgataccctgcgcgaacagggtcttact
gtggatattcgccacattatgcttgtggctgacctcatgacctgcgatggagaagtaaag
cagataggaaggcacggaatctcaggtgagaaggcaagtgtatttgcccgtgcagctttt
gaggttacagtaaatcacctgctggatgcagggatgcgtggggacgtagaccagcttcag
ggtgttacggaaaacattattgtcggtcagcctatccgtatgggtaccggggacgtacac
ctgataagccgaagaaaaagcgaagttgaagctgagtaa

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