Methanosarcina thermophila TM-1: MSTHT_1079
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Entry
MSTHT_1079 CDS
T03892
Name
(GenBank) OB-fold nucleic acid binding domain protein
KO
K06932
tRNA(Ile2)-agmatinylcytidine synthase [EC:
6.3.4.22
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthr03016
]
MSTHT_1079
Enzymes [BR:
mthr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.22 tRNAIle2-agmatinylcytidine synthase
MSTHT_1079
Transfer RNA biogenesis [BR:
mthr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSTHT_1079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TiaS_FLD
TiaS_TCKD
Zn_ribbon_TiaS
tRNA_anti-codon
Zn_ribbon_IS1595
tRNA_anti_2
Zn_ribbon_SprT
zf_Rg
Cas12f1-like_TNB
Zn_ribbon_6
Zn_ribbon_DUF2089
C1_1
Zn_ribbon_TFIIB
YdjO
Fimbrial_PilY2
tRNA_anti-like
Zn_ribbon_GTF2H2
DZR_2
HypA
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AKB12837
UniProt:
A0A0E3KPH1
LinkDB
All DBs
Position
complement(1335125..1336411)
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AA seq
428 aa
AA seq
DB search
MIIGIDDTDSNDGMCTTYLGALLLDELQAYGTLETLPLLIRLNPTIPYKTRGNAAVALKI
RTDCPEKVTAHVVSRIEELAHMECEKTNPGVVFIPENDYDRLKPVLGNFFEKAVKDVIEI
QEAKTLISELGIPSKGFKNGRGLIGSLAACGAMLNLEAWDHTFEYLAYRQKESWGTPREV
EKESFFEADRKTYPGTWDTVDLKSRQVVCVPHSGDPVLFGIRGENPAIVAEAASLIRAEP
IERFAVYRTNQGTDMHLLSVTSFAEIQDMHSYRLEGTVQAIPRTITGGHVIFPIRDEEGN
EIDCAAFEPTKNFRLLIRKLRPGDKVELSGSVSSRTLNIEKIEIKTLTPLYKEENPICPN
CGKHMKSSGRAQGFRCKKCGTHAVSKITCEIKRDLVAGLYEVPPCARRHLAKPLVREQKS
NVNIFPAR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgattatcggaattgatgatactgactcaaacgatggaatgtgcacaacttatctggga
gctttgctgctggacgaacttcaggcttatggtactctggagactcttccactcctaata
cgcctgaatcctaccatcccttacaaaacaagaggaaatgctgcagtagccctgaagatc
aggactgactgcccggaaaaggtaactgcccatgttgtgtccagaatagaagaactcgcg
cacatggaatgcgagaaaaccaatcctggagtagtttttattccggaaaatgattatgat
aggctcaaacctgttctcggaaacttttttgagaaagctgtaaaggatgttatcgaaata
caggaggcaaaaacgctcatctcggaacttgggattccctcaaagggttttaagaacggg
agaggattgataggatctcttgcagcatgcggggctatgctgaaccttgaagcatgggat
cacacctttgagtaccttgcatacaggcaaaaggaaagctgggggaccccacgtgaggtc
gagaaggaaagtttctttgaggctgacaggaagacgtaccctggcacctgggacactgtg
gaccttaaaagcaggcaagttgtctgcgtaccccactcgggtgatcccgtgcttttcgga
ataagaggagaaaatcctgccatagttgctgaagctgcatccctgatcagagccgaacct
atcgaacgttttgccgtatacaggacaaatcagggtacggatatgcatctgctttctgta
acaagtttcgctgaaatccaggatatgcattcttataggcttgagggcacagtccaggca
attccgaggacaattactgggggacatgttatatttccaatcagggatgaggaaggaaat
gaaatcgactgtgcagccttcgagcccacaaagaacttccggttgcttataaggaaactc
aggcccggagataaggttgaactgtcaggaagtgtcagttccagaacccttaatatcgaa
aaaattgaaataaaaacactcactcctctttacaaagaagaaaatcctatatgtccgaac
tgcggaaaacacatgaaatcttcaggcagggctcagggtttccgctgtaaaaaatgtgga
acccatgccgtctcaaaaatcacctgtgagataaaaagagaccttgtcgcaggactatat
gaagtcccgccctgcgcccgcagacatcttgcaaagcccctggtaagggaacaaaaatct
aacgtaaacatcttccctgcccgctaa
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