Methanosarcina thermophila TM-1: MSTHT_1080
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Entry
MSTHT_1080 CDS
T03892
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthr03000
]
MSTHT_1080
Transcription factors [BR:
mthr03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSTHT_1080
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
MerR
HTH_11
MerR_1
HTH_25
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB12838
UniProt:
A0A0E3NB66
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All DBs
Position
1336560..1337543
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AA seq
327 aa
AA seq
DB search
MAKEVLIHQIIDVLTRAGFVISDRCNIRPRSFDIAARKGEILLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDIIALNVQTLHDYFIENVPPLVAAAP
GGLYVSIEGDILKKARMSQSMSLGTLAAMVGVSRRTISKYEEEGMDASIDVVLQLEEILG
VELAKPIDILKSCRSRKPRKKVEPRIEEKKKPSALLPEDLVLNTLSMLGYDVLPTSQAPF
KAISRDKSSVILTGVSEFNTTVIKRAHLMSSISCVTETQSVFIINGRTKVKSVENTVMVE
KNELDRMSDSQEFLNLIEERKENHSRV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagtactcatacatcaaataattgatgtattgacacgtgcaggttttgta
atttccgatcgatgcaatatacgtccaagaagttttgatattgccgcacggaaaggcgag
atactattactttgcaaggttttatttaatattgacggtctgaatgaagagaccgccaga
gagatgaagtacctggccgaatatcttggaggttctgctattgttgtgggggcaaagaca
agagatcagatgcttgaggatagcgttgtttacatgcgctacgacatcattgccctaaat
gtgcaaacactccacgattactttattgaaaatgttcctcctctggttgcagcagcacct
ggcgggctgtatgtctccatagaaggggatatcctcaaaaaagccaggatgagtcagtca
atgtctcttgggacccttgctgccatggtaggtgtctcaaggaggacaattagtaagtac
gaagaagagggcatggacgcatcgatagacgtcgtgctccagctggaagaaattttaggg
gttgaactcgctaagcccattgatatcctgaaatcctgcagaagcagaaagcccaggaag
aaggtagaacccagaattgaagagaagaaaaagccttccgcccttttgcccgaagatctt
gtccttaatacactttcaatgctaggatatgacgttcttcctacctcacaggctcctttc
aaggcaatttcacgggacaaatcttcagttatccttactggagtcagcgaattcaatact
accgtaatcaaaagggctcatcttatgagcagtatttcctgcgttactgaaactcaatcc
gtattcattatcaacggacgtaccaaggtaaaatccgtagaaaacacggtaatggtcgag
aaaaatgagcttgacaggatgagtgattctcaggaattccttaacctcatagaagaacgt
aaggaaaatcatagcagggtgtaa
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