Methanosarcina thermophila TM-1: MSTHT_1093
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Entry
MSTHT_1093 CDS
T03892
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthr03400
]
MSTHT_1093
Enzymes [BR:
mthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSTHT_1093
DNA repair and recombination proteins [BR:
mthr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSTHT_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
ResIII
HHH_5
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
Cdd1
GARS_N
Motif
Other DBs
NCBI-ProteinID:
AKB12851
UniProt:
A0A0E3NBU8
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All DBs
Position
1352126..1354315
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AA seq
729 aa
AA seq
DB search
MKIESLDLPDEVKQFYLDSGILELYPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAM
LKSILNGGKALYIVPLRALASEKFKRFREFSKLGIRVGISTGDYDLRDEGLGVNDIIVAT
SEKTDSLLRNETVWMQEISVVVADEVHLIDSPDRGPTLEITLAKLRKMNPSCQILALSAT
IGNADELAAWLEAGLVLSEWRPTELREGVFFNGTFYCKDREKSIEQSTKDEAVNLVLDTL
REDGQCLVFENSRKNCMAFAKKASSAVKKILSAEDKEALAEIADEVLENSETDTSAALAA
CIRSGTAFHHAGLTTPLRELVEDGFRAGKIKLISSTPTLAAGLNLPARRVVIRSYRRYSS
EDGMQPIPVIEYKQMAGRAGRPRLDPYGEAVLVAKSYEEFVFLFRNYIEADAEDIWSKLG
TENALRTHVLSTISNGFARTKEELMEFLEATFFAFQYSNFGLSTVVDECLNFLRQEEMLE
KTDTLISTSFGKLVSKLYIDPLSAARIVKGLKEAKILTELTLLHLVCSTPDMRLLYMRNQ
DYQDINDYVIAHADEFVRVPSPFNYTEYEWFLGEVKTSLLLVDWIHEKSENEICLKFGIG
EGDIHAIADIAEWLMHVTAQLARLLELKGAKEAAELEKRIHYGASPELMDLLDIRGIGRM
RARKLYESGFRSSAELAGADPVKVAALLGPKIADRIFKQIGRREVLPEIAEPTLPEKSPS
SGQKTINDY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtctcgatctgcccgatgaagtaaaacagttttatcttgactctggg
attctcgaactttatccccctcaggctgaagctgtggaaaaagggctgcttgaaggaaga
aacctgcttgctgcgatccctacagcttcagggaagactctccttgcagagcttgcaatg
ttgaaatccattcttaatggaggaaaggctctctacattgtgcctcttagagctctggct
tccgagaaattcaaaaggtttcgggaattttcgaaacttggaatcagagtagggatctct
acaggggactatgacctgcgggatgaagggctcggggtaaatgacattatagttgcgacc
tctgagaaaaccgattcattgctcaggaatgagactgtctggatgcaagaaatttccgtg
gtcgtagccgatgaagtacatctcatcgattctccggataggggtcccacgcttgagatc
acccttgcaaaacttcggaaaatgaacccttcctgtcaaatcctagcgctatctgcaact
atcggaaatgctgacgaacttgcagcctggctggaagccgggcttgtattaagcgaatgg
agacctaccgaacttcgggaaggggtattctttaacgggactttttattgcaaagatagg
gaaaagtctattgaacagtctacaaaagacgaagccgttaatcttgtgctggatactctc
agagaagatgggcagtgtctcgttttcgaaaacagcagaaaaaactgcatggctttcgca
aaaaaggcgtcttcagctgttaaaaaaatcctctctgcagaagacaaggaagctctagca
gaaattgcagacgaagttctggaaaacagtgaaaccgatacctcggcagctcttgcagcc
tgtatccgctcaggcacggcttttcaccatgcggggcttaccactcctttaagggaactt
gttgaggatggcttcagggctggaaagataaaactgatttcaagtactcctactctagca
gctgggctcaacctgcctgcacggcgtgtagttatccggagttaccgacgctattcttct
gaagacggaatgcagcctattcctgtaattgagtacaaacagatggcaggcagggcaggc
aggccgaggcttgacccctatggagaagccgtgcttgttgcaaaatcatatgaggaattt
gttttcctctttaggaactatatcgaagccgatgccgaagatatctggtccaagttgggg
accgaaaatgcccttaggacacatgtactctccacaatttccaatggttttgcgcggaca
aaagaagagctcatggaatttctggaggcgacctttttcgctttccagtactcgaatttc
gggctttctacggttgtggatgaatgcctgaactttttgcgccaggaagagatgcttgag
aaaaccgacacccttatttctacaagtttcgggaaacttgtctcaaagctctatattgac
cctctctcagctgcccgaattgtaaaggggcttaaagaagcaaagatccttaccgagctt
accctgcttcatctagtgtgcagcacgcctgatatgcgcctgctttatatgcggaaccaa
gactatcaggacatcaatgattatgtaattgctcatgcagatgagttcgtaagagtgccc
agcccctttaattatacagaatatgagtggttcctgggagaagtcaagacttcccttctt
ctggttgactggatacatgaaaaatccgaaaatgaaatctgtttaaagtttggcataggg
gaaggagacatccatgcaattgcagatattgcagaatggttaatgcatgtcactgcccag
cttgcaaggctccttgagctcaaaggggcaaaagaggctgcagaactggagaaaagaatc
cactatggagcatctcccgaacttatggatctgcttgatataagaggcataggacgcatg
agggcaaggaaactttacgagtcaggtttcaggtcttcagcagagcttgctggggctgac
cctgtgaaagtggctgcacttttaggaccgaaaattgcagacaggatttttaagcagatc
ggcagaagagaggtgctccccgaaattgctgagcccacacttcctgagaaaagtccttct
tcgggacaaaaaacgatcaacgattattga
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