Methanosarcina thermophila TM-1: MSTHT_1137
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Entry
MSTHT_1137 CDS
T03892
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthr03016
]
MSTHT_1137
Enzymes [BR:
mthr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSTHT_1137
Transfer RNA biogenesis [BR:
mthr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSTHT_1137
Prokaryotic type
MSTHT_1137
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB12895
UniProt:
A0A0E3N8V8
LinkDB
All DBs
Position
complement(1401534..1402544)
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AA seq
336 aa
AA seq
DB search
MSSAGKLPSEAERILIQKSRAWTNPSYGSYPEKRPILEYIEKGVVNIDKPAGPTSHEVAA
WVKAILGVSTAGHAGSLDPKVTGLLPILLGKATKAVPALRLSGKEYICLLKLHKEMPQKR
IREVCEEFTGPIYQMPPVKSAVKRVIRIRTIYYLEVLEIEGSSVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQELRRTKAGPFTEETLITLQDLKDAYVFWKEDGDESELRRVIMPMET
AVAHLPKIVMRDSAVDAVCSGAALAVPGITSLDANLKKGNLTALFTLKGELVALAKAEMS
TEDILKASTGFAATSIRVIMETGTYPKGWVKKGDNV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgccggcaaattgccatccgaagctgaaagaattctgatccagaagtcccgt
gcctggacgaatccatcttatggttcctatcctgagaaacgcccaatcctcgaatacatt
gagaaaggcgttgtaaatatcgataaaccagctggaccgacaagccatgaagttgcagcc
tgggtaaaggctattcttggtgtgagcacggcagggcatgcaggctcgcttgatcccaag
gttacggggcttttgcctattttactcggaaaggctacaaaggcagtccctgctctgcgc
ctttcaggaaaggaatatatctgccttctgaagcttcataaggaaatgcctcaaaaacgg
ataagggaagtctgtgaggaattcacgggacctatctaccagatgcctcctgttaaatcc
gctgtcaagagagttatcaggataaggacgatttattatctcgaggtgcttgagattgaa
ggcagttcagtgctctttcgcgtaggctgcgaagccgggacttatatcaggaaactctgc
catgatatagggcttgctcttggctgcggcgggcatatgcaggaactcaggagaacaaag
gcaggaccttttactgaggagacacttataacgcttcaggatctgaaagatgcatacgta
ttctggaaagaagatggtgacgagtctgaactccgacgggtaatcatgccaatggaaacc
gctgtagcccaccttcccaaaatcgtcatgcgggacagtgcagtggatgccgtctgctcc
ggcgccgctctggcagttcctggcatcacaagccttgatgcaaaccttaaaaaagggaat
cttacagcactatttacgcttaaaggtgaactcgttgcccttgcaaaagctgaaatgagt
acagaggatattcttaaagcctctacagggtttgcagcaacctcgatccgagttataatg
gaaaccggaacttacccgaaaggttgggttaaaaaaggagataatgtttaa
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