KEGG   Methanosarcina thermophila TM-1: MSTHT_1517
Entry
MSTHT_1517        CDS       T03892                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mthr  Methanosarcina thermophila TM-1
Pathway
mthr03030  DNA replication
mthr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHT_1517
   03410 Base excision repair
    MSTHT_1517
   03450 Non-homologous end-joining
    MSTHT_1517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthr03032]
    MSTHT_1517
   03400 DNA repair and recombination proteins [BR:mthr03400]
    MSTHT_1517
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mthr04147]
    MSTHT_1517
DNA replication proteins [BR:mthr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSTHT_1517
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSTHT_1517
DNA repair and recombination proteins [BR:mthr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSTHT_1517
Exosome [BR:mthr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSTHT_1517
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF6121
Other DBs
NCBI-ProteinID: AKB13275
UniProt: A0A0E3KPS3
LinkDB
Position
complement(1846837..1847853)
AA seq 338 aa
MGTDIGDLLQKRKAKLSDFANQVVAIDGFNALHQFLSIIRQRDGTPLIDSTGRVTSHLSG
LLYRTASLVEAGIKPLFVFDGKPPDLKSETLNKRKEVRESSWEKWESAKAAGDLKSAYKY
AQASSKVNEEIIEDSKYLLDIMGIPFVQAPCEGEAQAAHIVLKGDANCVASQDYDSFLFG
APVVVRNLAITGKRKLPGKNVYVDVEPEIIELEESLKALEITKEQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGDIYAVLREKGVEIEAVDRIREIFLHPEVTDNYEIKWGKPDSER
LFKFLCEDHDFSVDRVEKAVERLKATSGARQRTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcacagatataggcgacctgctccagaagagaaaagctaagctttcggattttgca
aaccaggtggttgcaattgatggttttaacgcactgcaccagtttttgagcattattcgc
cagcgggatggaactcctttgatcgattctacagggagagtaacctctcatctctcaggc
ttgctctaccggacagcaagccttgttgaagccgggatcaagcctctttttgtttttgac
ggcaagcctcctgacctcaagtccgaaactctgaataaaaggaaagaagtaagggaatct
tcatgggagaagtgggaaagcgcaaaggctgcaggagatttaaaatcagcttataagtat
gctcaggcttcttcaaaggtaaatgaggagatcattgaagattccaagtacctgcttgat
attatgggaattccttttgttcaggctccctgtgaaggagaagcgcaggctgcacatatt
gtgcttaaaggagatgcgaattgtgttgcatcacaggattatgattcctttcttttcgga
gctccggttgtcgtccggaatctggcaatcacgggaaaacgcaagcttcccggaaaaaac
gtctatgttgatgtcgagcccgagataattgagctggaagaatctctcaaagccctggaa
attaccaaggagcagctcatagatatagcaatatgtgtgggaacggattacaacaaagga
ctggaaaaggtaggtcctaaaacagcactcaaacttattaaaaagcatggagatatttac
gctgtgctccgtgaaaaaggggtggagatcgaagctgtggacagaatcagggaaattttt
ctccatcctgaagtaacggacaactacgaaataaagtggggtaagcctgactctgaaagg
ctcttcaaattcctttgtgaagatcacgacttctcggttgacagggtagaaaaagctgta
gaacggcttaaagcaacctccggagcccgacagaggacccttgaccagtggttttga

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