Methanosarcina thermophila TM-1: MSTHT_1886
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Entry
MSTHT_1886 CDS
T03892
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
mthr
Methanosarcina thermophila TM-1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
Trypan_PARP
UPF0758_N
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AKB13644
UniProt:
A0A0E3H981
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Position
complement(2313750..2316605)
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AA seq
951 aa
AA seq
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MNESFFSEKPAFIKHPLIKPDTVEQRLYQLNLAGKALEKSSLIVLPTGLGKTIIALFVIA
SRLQRYGGKALILSPTKPLVEQHAAFFKKVMALPEEEILAFTGSIPPAKREELWAQGKLI
VSTPQVIENDLLTKRISLEDVSHITFDEAHRAVGNYAYTFIAEKYFESAKNPHVLGITAS
PGSSDEKISEVCQALHVENVSVKTEKDRDVRPYVQEKEIEWIQVQLPSEMVEIRDYLEKI
FNDRLGIIRGLGFSAGSGKYVSKKDLLLLQKKLQGEIRMGGDPAVFTALSVLAEMVKVNH
AVEMVETQGLETLRKYLEKLDADASSNSASKAARRLMDDLFMRKTLHRLKECEIEHPKLE
LARKIVSEQLKESPESRVIVFTNYRDTAELVTNALSKVPGVVPTRFVGQASRRKDKGLTQ
KQQVEILNKFRAGEYNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRQHK
GRVIVLVTKGTRDEAYYWSSKNKEKRMLNSIQGLEALLVPNETKQSSKISDFESGALISN
NKTDETVIIHNKPKEPEIIHLKQETGDLVQKNLSLERETSDLAVNCKDKITDSNDLTIDI
TLGNRNTNEGSDCGRENEEIKENSFEAGNREEKENRIGEESEKGKKQKDGEKTREEIIKE
KQKTLVDFETIFGKKSEIKVESEPESEPESEPESESEPESESEPESESGSEASKEPEEEY
EPEPAVELPGIETKPETLKIVVDYREAKSGVANVLDRLGVEVSFAALEIGDYVVSDRLAV
ERKRTDDFVNSLIAGKRNLFAQLADLAREYQKPVLIIEGTELFTSRQINPNAIYGSLISI
AIDFGVSLLYSRDEEESAAILKMLAKREQMDNKREINPHGKKSTRTLTEQQEYLVSAIAD
IGPKAARNLLLHFGSVEAIMKADAEELKKVKLIGPKRAAKIREILETPYSG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagttttttttctgagaagccagccttcataaagcatccgctaataaagcct
gatactgttgagcagaggctctatcagttgaaccttgcagggaaggcactcgaaaaatca
agccttattgtgcttcctacaggacttgggaaaactataatagctctttttgtgattgct
tccagacttcagcgttacgggggtaaagccctgattctctctccaacgaaaccgcttgta
gagcaacatgcagcttttttcaagaaggtaatggctcttcccgaagaagagattctggct
tttacgggcagtattcctcctgcaaaacgggaagagctctgggcgcagggaaaattgata
gtatccacccctcaggtaattgaaaatgatcttcttacaaaaaggatcagccttgaggat
gtaagccatataacctttgatgaagctcacagggcagttgggaattatgcttataccttt
attgcggaaaaatatttcgagagcgcaaaaaatcctcatgtgctcggaattactgcaagc
cctggcagttcggatgagaaaatctcggaggtctgtcaggctttacatgttgagaatgtg
tcagtgaagactgagaaagatagagatgtccgcccttatgtgcaggaaaaagagatagaa
tggattcaggtacagctcccttctgagatggttgagatccgggactatcttgagaaaatc
tttaatgaccggctcggaataataagaggcctgggtttttcggcaggcagtgggaaatat
gtctccaaaaaagacctcctgcttctccagaagaaacttcagggtgaaatccgaatgggg
ggcgatcctgcagtttttactgccctatcagtgcttgctgaaatggtaaaggtaaatcat
gctgtggagatggttgagactcaggggcttgagaccctcaggaagtatttagagaaactg
gacgcagatgcctcttcaaatagtgcaagcaaagctgcaagaagattaatggatgatctc
tttatgagaaaaacccttcacaggttaaaggagtgcgagattgaacatcctaaactcgag
cttgcgcgaaagatcgtatccgagcaactgaaagaaagccctgagtccagagtaattgtt
tttacaaattacagggacacagcagagttagtgacaaatgccctgtccaaagttccggga
gttgtacctacccgctttgtgggacaggcatcgcgccgcaaggataaagggcttacgcaa
aagcagcaggtagagatcctcaataagttcagggcaggagaatataatgtacttgtggct
acctcagttgccgaagagggacttgatattccttctacagacctggtactcttttacgaa
cccattccttcggaaatccggagcatccagcgcaaaggcaggacagggagacagcataaa
ggcagagtgattgtacttgtgacaaaaggtacacgtgatgaagcttattactggagcagc
aagaacaaggaaaaaaggatgcttaatagcatacaggggcttgaagccctgctggttcct
aatgaaacaaaacagagctctaaaatttctgattttgaatccggagctctaatttcaaat
aataaaactgatgaaactgtaatcatacataataaacccaaagaaccggagattatacat
ttaaaacaggaaaccggagatttagtgcagaagaatctcagtctagagcgggagacaagc
gatttagctgtaaactgtaaggataaaattacagacagcaacgatctaactatagatata
actttaggtaataggaatacgaatgaaggctcagattgcggcagggagaatgaagaaata
aaagaaaatagcttcgaagcggggaacagagaagagaaagaaaacaggataggggaagaa
agcgaaaaagggaaaaaacaaaaggatggggagaaaactagagaggaaatcataaaagaa
aagcaaaaaacccttgtagatttcgaaactatttttggaaagaaatctgaaattaaagtc
gaatctgaacctgaatctgaacctgaatctgaacctgaatctgaatctgaacctgaatct
gaatctgaacctgaatctgaatctggatctgaagcttcaaaagaacctgaagaggaatac
gaacctgaaccagccgtagaattgcccgggatagagaccaaacccgaaactcttaaaata
gtggtagattacagggaagcaaaaagcggggttgcaaatgttcttgacaggcttggagta
gaagtcagttttgcagcacttgaaattggggattacgttgtaagcgatcgacttgcagtg
gaaagaaagcgcacggatgactttgtaaattctcttattgctggaaagcgtaatctcttt
gcgcagttagcggatcttgcaagagaatatcaaaaacccgttcttattattgaaggaacg
gaacttttcacttcacgacaaatcaatccaaatgccatttacggttccttgatatctatt
gccattgattttggagtttcactgttatattcaagagatgaagaagagagtgctgcaata
ttaaaaatgcttgcaaagcgtgagcagatggataataagcgtgaaataaacccccacggg
aaaaagtcaacccgtacccttactgagcagcaggagtatcttgtctccgcgatagcagac
ataggaccgaaagccgcaagaaaccttcttttacattttgggtcggtagaggctattatg
aaggctgatgccgaagaactcaagaaagtaaaattaatagggccaaagagagcagctaaa
atcagggagatccttgaaaccccttatagcggataa
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