KEGG   Methanosarcina thermophila TM-1: MSTHT_1895
Entry
MSTHT_1895        CDS       T03892                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mthr  Methanosarcina thermophila TM-1
Pathway
mthr03030  DNA replication
mthr03410  Base excision repair
mthr03420  Nucleotide excision repair
mthr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHT_1895
   03410 Base excision repair
    MSTHT_1895
   03420 Nucleotide excision repair
    MSTHT_1895
   03430 Mismatch repair
    MSTHT_1895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthr03032]
    MSTHT_1895
   03400 DNA repair and recombination proteins [BR:mthr03400]
    MSTHT_1895
DNA replication proteins [BR:mthr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSTHT_1895
DNA repair and recombination proteins [BR:mthr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSTHT_1895
   MMR (mismatch excision repair)
    Other MMR factors
     MSTHT_1895
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSTHT_1895
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AKB13653
UniProt: A0A0E3KZ50
LinkDB
Position
complement(2328902..2329639)
AA seq 245 aa
MFKAAINAELLKDAIAALAVIVDEVRIKIKPEGISVKAVDPANVAMGIFELGSSAFDEYS
ADESEIGIDLNKIMDLLGIAEKNDTVRMELEEGNQKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLDLPAKVVLNGADLRRAVKAAEKISDHLLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLADIVKPTNKVNEVSLSLGKDFPILIDFEIANGAGRISYLLAP
RIESE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgccgcattggctgta
attgtagatgaggtcagaattaaaataaagccggaaggtatttcggtaaaagctgttgat
cctgccaatgtcgcaatgggaatttttgagcttggatcatccgctttcgatgaatatagc
gctgatgagtctgaaataggaatagacctgaacaagattatggacctgctgggaattgcg
gagaagaacgacacagtccggatggaacttgaagaagggaatcaaaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacaattcgggcagaacca
agagttccccagctagatttgcctgcaaaagttgtcctgaatggagctgacctcaggcgt
gctgtgaaagctgcagagaaaataagtgatcatctactaatgggggtttctgatgatacc
ttctatatggaagcaaaaggcgatactgaccaggttcgcctggagatgggtagggaccag
ctgatcgacctgaaggcaggtgaagcctgttctcttttctctctggactatctggccgac
atagtcaaacctacgaataaagtcaatgaggtaagtctttcccttggaaaagatttcccg
atactcatagatttcgagattgcaaacggtgcaggcagaatttcttatctcctggctccg
agaattgagtcggaataa

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