Methanosarcina thermophila TM-1: MSTHT_1987
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Entry
MSTHT_1987 CDS
T03892
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mthr
Methanosarcina thermophila TM-1
Brite
KEGG Orthology (KO) [BR:
mthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthr03016
]
MSTHT_1987
Enzymes [BR:
mthr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MSTHT_1987
Transfer RNA biogenesis [BR:
mthr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSTHT_1987
Prokaryotic type
MSTHT_1987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKB13745
UniProt:
A0A0E3NCL2
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All DBs
Position
2435727..2436536
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AA seq
269 aa
AA seq
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MRVALKLAYIGTGFHGSQLQPNVETVEGALFKALRNLGIIESPKSANYTCAGRTDAGVHA
LEQVVAFDTDKPELAIPRIINSELPPTIWAWAHAEVPRSFDARRDAVSRHYRYVMVGKEY
DISRIREASKLLLGTHDFENFSRTNGEKSTIRTIERINVRVDGDLIKIDVVGNSFLWNMV
RKIVTALSMIGKGVRDNDWLLQMLNPDIYEEGIEPAPAYGLTLLKVNYNEEMGWIEDNYS
IRRASELNQKHILRHRVMAEVLEELISHE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgctttaaaacttgcatacataggcaccgggtttcacggctcccagctccag
cccaacgtcgagaccgtagagggagcactcttcaaggctctccggaatctcgggattata
gaaagccctaaatctgcgaattacacctgcgcaggcaggactgatgccggggttcatgcc
cttgaacaggttgttgcttttgatacggacaagccggaactggcaatcccaaggatcata
aattccgagctccctccgacaatctgggcatgggctcacgcggaagtgccccggagcttt
gatgccaggagagatgcagtttccagacattaccgatacgtgatggttgggaaagagtac
gatatttccagaattcgggaagcttcgaaattgctgctgggcacccatgattttgaaaat
ttttctcgaaccaacggagaaaaaagtacaattcgaaccatagaaaggatcaatgtccgc
gtagatggagatcttataaagatcgatgttgttggaaatagttttctctggaatatggtc
cggaaaatcgtaaccgccctttccatgataggaaaaggggtacgtgacaacgactggctg
ctccagatgcttaatccggatatttatgaagaagggattgaaccggctcctgcctatgga
ttgactcttctgaaagtgaactataatgaggaaatgggatggattgaagacaattattct
atcaggagagcaagcgagctgaaccagaagcatatcctcaggcacagggttatggcagaa
gtactggaagaactgatctctcacgagtaa
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